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4930555M17Rik Gene Detail
Summary
  • Symbol
    4930555M17Rik
  • Name
    RIKEN cDNA 4930555M17 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925289
    NCBI Gene: 78039
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:5578059-5580393 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 1.96 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    195 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925289
 lncRNA gene Chr3:5578055-5580393 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006114
 lincRNA gene Chr3:2282930-2285268 (-)
A/J MGP_AJ_G0006105
 lincRNA gene Chr3:2647312-2649650 (-)
AKR/J MGP_AKRJ_G0006081
 lincRNA gene Chr3:2437596-2439934 (-)
BALB/cJ MGP_BALBcJ_G0006081
 lincRNA gene Chr3:2358164-2360502 (-)
C3H/HeJ MGP_C3HHeJ_G0006031
 lincRNA gene Chr3:2671072-2673410 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006243
 lincRNA gene Chr3:2757072-2759410 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005563
 lincRNA gene Chr3:1968054-1970417 (-)
CAST/EiJ MGP_CASTEiJ_G0005968
 lincRNA gene Chr3:2743358-2745692 (-)
CBA/J MGP_CBAJ_G0006016
 lincRNA gene Chr3:2505172-2507510 (-)
DBA/2J MGP_DBA2J_G0006036
 lincRNA gene Chr3:2248315-2250653 (-)
FVB/NJ MGP_FVBNJ_G0006061
 lincRNA gene Chr3:2191083-2193421 (-)
LP/J MGP_LPJ_G0006118
 lincRNA gene Chr3:2814407-2816745 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006050
 lincRNA gene Chr3:3153191-3155608 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006246
 lincRNA gene Chr3:2248366-2250704 (-)
PWK/PhJ MGP_PWKPhJ_G0005913
 lincRNA gene Chr3:2522450-2524797 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005823
 lincRNA gene Chr3:2437135-2439474 (-)
WSB/EiJ MGP_WSBEiJ_G0006016
 lincRNA gene Chr3:2283497-2285835 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 78039 NCBI Gene Model | MGI Sequence Detail 2335 C57BL/6J ±  kb
transcript NR_166469 RefSeq | MGI Sequence Detail 398 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory