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4930439A04Rik Gene Detail
Summary
  • Symbol
    4930439A04Rik
  • Name
    RIKEN cDNA 4930439A04 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925369
    NCBI Gene: 78119
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:37368748-37373253 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 15.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    208 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925369
 lncRNA gene Chr1:37353518-37373313 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002662
 antisense lncRNA gene Chr1:35941361-35945866 (-)
A/J MGP_AJ_G0002638
 antisense lncRNA gene Chr1:34956663-34961190 (-)
AKR/J MGP_AKRJ_G0002618
 antisense lncRNA gene Chr1:35443293-35447748 (-)
BALB/cJ MGP_BALBcJ_G0002624
 antisense lncRNA gene Chr1:34628876-34633365 (-)
C3H/HeJ MGP_C3HHeJ_G0002584
 antisense lncRNA gene Chr1:35670469-35674929 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002768
 antisense lncRNA gene Chr1:37530271-37534728 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002315
 antisense lncRNA gene Chr1:31976608-31981264 (-)
CAST/EiJ MGP_CASTEiJ_G0002557
 antisense lncRNA gene Chr1:35525330-35529812 (-)
CBA/J MGP_CBAJ_G0002579
 antisense lncRNA gene Chr1:38545141-38549646 (-)
DBA/2J MGP_DBA2J_G0002584
 antisense lncRNA gene Chr1:34281227-34285703 (-)
FVB/NJ MGP_FVBNJ_G0002604
 antisense lncRNA gene Chr1:33814751-33819256 (-)
LP/J MGP_LPJ_G0002664
 antisense lncRNA gene Chr1:36290609-36295076 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002595
 antisense lncRNA gene Chr1:40745754-40750222 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002773
 antisense lncRNA gene Chr1:35505669-35510174 (-)
PWK/PhJ MGP_PWKPhJ_G0002514
 antisense lncRNA gene Chr1:34042914-34047434 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002468
 antisense lncRNA gene Chr1:35436684-35441160 (-)
WSB/EiJ MGP_WSBEiJ_G0002586
 antisense lncRNA gene Chr1:35454726-35460419 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    4
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086064 Ensembl Gene Model | MGI Sequence Detail 4506 C57BL/6J ±  kb
transcript ENSMUST00000137241 Ensembl | MGI Sequence Detail 739 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory