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Rps27a Gene Detail
Summary
  • Symbol
    Rps27a
  • Name
    ribosomal protein S27A
  • Synonyms
    0610006J14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925544
    NCBI Gene: 78294
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:29495842-29498040 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 16.79 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    135 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925544
 protein coding gene Chr11:29495842-29498109 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018109
 protein coding gene Chr11:27561713-27565996 (-)
A/J MGP_AJ_G0018081
 protein coding gene Chr11:26539276-26541539 (-)
AKR/J MGP_AKRJ_G0018046
 protein coding gene Chr11:27404677-27406940 (-)
BALB/cJ MGP_BALBcJ_G0018049
 protein coding gene Chr11:26742826-26745089 (-)
C3H/HeJ MGP_C3HHeJ_G0017863
 protein coding gene Chr11:27318814-27321077 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018502
 protein coding gene Chr11:28496325-28498955 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016159
 protein coding gene Chr11:25178268-25180656 (-)
CAST/EiJ MGP_CASTEiJ_G0017425
 protein coding gene Chr11:27374849-27377119 (-)
CBA/J MGP_CBAJ_G0017837
 protein coding gene Chr11:29844691-29846954 (-)
DBA/2J MGP_DBA2J_G0017947
 protein coding gene Chr11:26398975-26401238 (-)
FVB/NJ MGP_FVBNJ_G0017939
 protein coding gene Chr11:26199433-26201696 (-)
LP/J MGP_LPJ_G0018019
 protein coding gene Chr11:27810983-27814128 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017965
 protein coding gene Chr11:30932689-30934952 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018542
 protein coding gene Chr11:27500992-27505000 (-)
PWK/PhJ MGP_PWKPhJ_G0017207
 protein coding gene Chr11:26486875-26489374 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017002
 protein coding gene Chr11:27198111-27200390 (-)
WSB/EiJ MGP_WSBEiJ_G0017478
 protein coding gene Chr11:27209098-27211759 (-)



Homology
more
  • Human Ortholog
    RPS27A, ribosomal protein S27a
  • Vertebrate Orthologs
    7
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPS27A, ribosomal protein S27a
  • Synonyms
    CEP80, eS31, HEL112, S27A, UBA80, UBC, UBCEP1, UBCEP80
  • Links
    NCBI Gene ID: 6233
    neXtProt AC: NX_P62979
    UniProt: P62979

  • Chr Location
    2p16.1; chr2:55231903-55235853 (+)  GRCh38
  • Human Ortholog
    RPS27AP5, ribosomal protein S27a pseudogene 5
  • Synonyms
    RPS27A_1_141
  • Links
    NCBI Gene ID: 100271374

  • Chr Location
    chr1:192716135-192716683 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    17
  • Chemically induced (other)
    1
  • Gene trapped
    13
  • Targeted
    3
  • Genomic Mutations
    1 involving Rps27a
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    15 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    28
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 78294 NCBI Gene Model | MGI Sequence Detail 2199 C57BL/6J ±  kb
transcript NM_001033865 RefSeq | MGI Sequence Detail 821 Not Specified  
polypeptide P62983 UniProt | EBI | MGI Sequence Detail 156 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 7
References
more
  • Summaries
    All 43
    Gene Ontology 10
    Phenotypes 11
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:314083 Khatter H, et al., Structure of the human 80S ribosome. Nature. 2015 Apr 30;520(7549):640-5
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory