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Lypd8l Gene Detail
Summary
  • Symbol
    Lypd8l
  • Name
    LY6/PLAUR domain containing 8 like
  • Synonyms
    2210407C18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925604
    NCBI Gene: 78354
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:58499030-58504318 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 36.21 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    254 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925604
 protein coding gene Chr11:58499030-58506901 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018364
 protein coding gene Chr11:58350443-58358236 (-)
A/J MGP_AJ_G0018334
 protein coding gene Chr11:56093949-56101747 (-)
AKR/J MGP_AKRJ_G0018303
 protein coding gene Chr11:57962287-57970092 (-)
BALB/cJ MGP_BALBcJ_G0018304
 protein coding gene Chr11:56450069-56457874 (-)
C3H/HeJ MGP_C3HHeJ_G0018116
 protein coding gene Chr11:57880986-57888768 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018755
 protein coding gene Chr11:60142225-60150793 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016404
 protein coding gene Chr11:53440481-53448856 (-)
CAST/EiJ MGP_CASTEiJ_G0017681
 protein coding gene Chr11:57975478-57983340 (-)
CBA/J MGP_CBAJ_G0018091
 protein coding gene Chr11:62897212-62905024 (-)
DBA/2J MGP_DBA2J_G0018200
 protein coding gene Chr11:55758961-55766763 (-)
FVB/NJ MGP_FVBNJ_G0018191
 protein coding gene Chr11:55447877-55455682 (-)
LP/J MGP_LPJ_G0018273
 protein coding gene Chr11:58896766-58905955 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018216
 protein coding gene Chr11:63979647-63987389 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018798
 protein coding gene Chr11:58006215-58013978 (-)
PWK/PhJ MGP_PWKPhJ_G0017453
 protein coding gene Chr11:56369755-56377537 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017245
 protein coding gene Chr11:57869409-57877492 (-)
WSB/EiJ MGP_WSBEiJ_G0017727
 protein coding gene Chr11:57666006-57673791 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    3
  • cDNA Data
    6
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 78354 NCBI Gene Model | MGI Sequence Detail 5289 C57BL/6J ±  kb
transcript NM_144544 RefSeq | MGI Sequence Detail 881 C57BL/6  
polypeptide NP_653127 RefSeq | MGI Sequence Detail 220 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR050918 CNF-like Phospholipase A2 Inhibitor
    IPR045860 Snake toxin-like superfamily
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
Other
Accession IDs
less
MGI:6448389
References
more
  • Summaries
    All 23
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:272510 Kant S, et al., Desmoglein 2 mutation provokes skeletal muscle actin expression and accumulation at intercalated discs in murine hearts. J Cell Sci. 2019 Feb 18;132(5):jcs199612
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory