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A930041C12Rik Gene Detail
Summary
  • Symbol
    A930041C12Rik
  • Name
    RIKEN cDNA A930041C12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925693
    NCBI Gene: 78443
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:107778116-107781716 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 52.23 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    160 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925693
 lncRNA gene Chr5:107778116-107781716 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004132
 antisense lncRNA gene Chr5:109674560-109679100 (-)
A/J MGP_AJ_G0004112
 antisense lncRNA gene Chr5:105464378-105468466 (-)
AKR/J MGP_AKRJ_G0004092
 antisense lncRNA gene Chr5:108865936-108873122 (-)
BALB/cJ MGP_BALBcJ_G0004098
 antisense lncRNA gene Chr5:106595393-106599041 (-)
C3H/HeJ MGP_C3HHeJ_G0004046
 antisense lncRNA gene Chr5:109314597-109319091 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004247
 antisense lncRNA gene Chr5:114158096-114161323 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003724
 antisense lncRNA gene Chr5:100524784-100528507 (-)
CAST/EiJ MGP_CASTEiJ_G0004009
 antisense lncRNA gene Chr5:108264015-108267394 (-)
CBA/J MGP_CBAJ_G0004040
 antisense lncRNA gene Chr5:118002013-118005212 (-)
DBA/2J MGP_DBA2J_G0004055
 antisense lncRNA gene Chr5:105600730-105603948 (-)
FVB/NJ MGP_FVBNJ_G0004073
 antisense lncRNA gene Chr5:104331414-104334640 (-)
LP/J MGP_LPJ_G0004134
 antisense lncRNA gene Chr5:110255337-110259724 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004062
 antisense lncRNA gene Chr5:122910197-122914099 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004243
 antisense lncRNA gene Chr5:108430657-108439222 (-)
PWK/PhJ MGP_PWKPhJ_G0003962
 antisense lncRNA gene Chr5:104406908-104409095 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003906
 antisense lncRNA gene Chr5:105943392-105949647 (-)
WSB/EiJ MGP_WSBEiJ_G0004044
 antisense lncRNA gene Chr5:108734195-108738641 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    3 involving A930041C12Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 78443 NCBI Gene Model | MGI Sequence Detail 3601 C57BL/6J ±  kb
transcript NR_046195 RefSeq | MGI Sequence Detail 537 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 13
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory