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Ccdc190 Gene Detail
Summary
  • Symbol
    Ccdc190
  • Name
    coiled-coil domain containing 190
  • Synonyms
    1700084C01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925715
    NCBI Gene: 78465
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:169756217-169762222 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 76.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    331 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925715
 protein coding gene Chr1:169756172-169764816 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016722
 protein coding gene Chr1:175615264-175622832 (+)
A/J MGP_AJ_G0016702
 protein coding gene Chr1:168431948-168437831 (+)
AKR/J MGP_AKRJ_G0016668
 protein coding gene Chr1:173511294-173517262 (+)
BALB/cJ MGP_BALBcJ_G0016663
 protein coding gene Chr1:168925526-168932721 (+)
C3H/HeJ MGP_C3HHeJ_G0016487
 protein coding gene Chr1:173760344-173767805 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017124
 protein coding gene Chr1:181426045-181435027 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014833
 protein coding gene Chr1:160199314-160205642 (+)
CAST/EiJ MGP_CASTEiJ_G0016067
 protein coding gene Chr1:173378825-173386246 (+)
CBA/J MGP_CBAJ_G0016462
 protein coding gene Chr1:187884219-187890645 (+)
DBA/2J MGP_DBA2J_G0016568
 protein coding gene Chr1:167308038-167314095 (+)
FVB/NJ MGP_FVBNJ_G0016566
 protein coding gene Chr1:165683771-165689658 (+)
LP/J MGP_LPJ_G0016639
 protein coding gene Chr1:176672395-176679838 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016591
 protein coding gene Chr1:195218605-195224468 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017161
 protein coding gene Chr1:173393344-173399290 (+)
PWK/PhJ MGP_PWKPhJ_G0015853
 protein coding gene Chr1:166531903-166538236 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015639
 protein coding gene Chr1:172159851-172167996 (+)
WSB/EiJ MGP_WSBEiJ_G0016129
 protein coding gene Chr1:173512768-173518492 (+)



Homology
more
  • Human Ortholog
    CCDC190, coiled-coil domain containing 190
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC190, coiled-coil domain containing 190
  • Synonyms
    C1orf110
  • Links
    NCBI Gene ID: 339512
    neXtProt AC: NX_Q86UF4
    UniProt: Q86UF4

  • Chr Location
    1q23.3; chr1:162824458-162868833 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000070532 Ensembl Gene Model | MGI Sequence Detail 6006 C57BL/6J ±  kb
transcript ENSMUST00000175731 Ensembl | MGI Sequence Detail 1128 Not Applicable  
polypeptide ENSMUSP00000135819 Ensembl | MGI Sequence Detail 289 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:154739 Quina LA, et al., Brn3a and Nurr1 mediate a gene regulatory pathway for habenula development. J Neurosci. 2009 Nov 11;29(45):14309-22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory