About   Help   FAQ
1700109G15Rik Gene Detail
Summary
  • Symbol
    1700109G15Rik
  • Name
    RIKEN cDNA 1700109G15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925721
    NCBI Gene: 78471
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:84607802-84611258 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 51.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    208 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925721
 lncRNA gene Chr11:84607802-84611258 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005272
 lincRNA gene Chr11:86156411-86159847 (-)
A/J MGP_AJ_G0005257
 lincRNA gene Chr11:82873893-82877329 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0005237
 lincRNA gene Chr11:83262576-83266795 (-)
C3H/HeJ MGP_C3HHeJ_G0005186
 lincRNA gene Chr11:85381560-85384990 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005389
 lincRNA gene Chr11:88786992-88790448 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004782
 lincRNA gene Chr11:79961314-79964741 (-)
CAST/EiJ MGP_CASTEiJ_G0005133
 lincRNA gene Chr11:86017700-86021158 (-)
CBA/J MGP_CBAJ_G0005176
 lincRNA gene Chr11:92546383-92549812 (-)
DBA/2J MGP_DBA2J_G0005193
 lincRNA gene Chr11:82448212-82451661 (-)
FVB/NJ MGP_FVBNJ_G0005218
 lincRNA gene Chr11:81941058-81944512 (-)
LP/J MGP_LPJ_G0005274
 lincRNA gene Chr11:86689996-86693432 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005201
 lincRNA gene Chr11:92694085-92697531 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005393
 lincRNA gene Chr11:85605202-85608632 (-)
PWK/PhJ MGP_PWKPhJ_G0005082
 lincRNA gene Chr11:83218992-83222496 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005004
 lincRNA gene Chr11:85153382-85156863 (-)
WSB/EiJ MGP_WSBEiJ_G0005181
 lincRNA gene Chr11:85449278-85452716 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Gene trapped
    3
  • Targeted
    1
  • Genomic Mutations
    2 involving 1700109G15Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 78471 NCBI Gene Model | MGI Sequence Detail 3457 C57BL/6J ±  kb
transcript NR_046197 RefSeq | MGI Sequence Detail 384 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 17
    Phenotypes 10
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory