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2400006E01Rik Gene Detail
Summary
  • Symbol
    2400006E01Rik
  • Name
    RIKEN cDNA 2400006E01 gene
  • Synonyms
    Gm43733
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925898
    NCBI Gene: 78648
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:41475682-41482909 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    311 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925898
 lncRNA gene Chr3:41455366-41482909 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006176
 lincRNA gene Chr3:39529910-39537040 (-)
A/J MGP_AJ_G0006168
 lincRNA gene Chr3:38561363-38568594 (-)
AKR/J MGP_AKRJ_G0006144
 lincRNA gene Chr3:39292033-39299266 (-)
BALB/cJ MGP_BALBcJ_G0006144
 lincRNA gene Chr3:38334601-38341827 (-)
C3H/HeJ MGP_C3HHeJ_G0006094
 lincRNA gene Chr3:39415174-39422306 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006306
 lincRNA gene Chr3:41159977-41167208 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005617
 lincRNA gene Chr3:36068095-36075439 (-)
CAST/EiJ MGP_CASTEiJ_G0006029
 lincRNA gene Chr3:39298748-39305864 (-)
CBA/J MGP_CBAJ_G0006079
 lincRNA gene Chr3:42322554-42329764 (-)
DBA/2J MGP_DBA2J_G0006098
 lincRNA gene Chr3:38026667-38033889 (-)
FVB/NJ MGP_FVBNJ_G0006122
 lincRNA gene Chr3:37400736-37407856 (-)
LP/J MGP_LPJ_G0006180
 lincRNA gene Chr3:40269671-40276825 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006112
 lincRNA gene Chr3:44772202-44779436 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006310
 lincRNA gene Chr3:39163425-39170543 (-)
PWK/PhJ MGP_PWKPhJ_G0005974
 lincRNA gene Chr3:37708779-37716026 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005883
 lincRNA gene Chr3:38827336-38832830 (-)
WSB/EiJ MGP_WSBEiJ_G0006076
 lincRNA gene Chr3:39180025-39187203 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106223 Ensembl Gene Model | MGI Sequence Detail 7228 C57BL/6J ±  kb
transcript ENSMUST00000199633 Ensembl | MGI Sequence Detail 643 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGI:5663870
References
more
  • Summaries
    All 16
    Diseases 1
    Phenotypes 7
  • Earliest
    J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory