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Plekhj1 Gene Detail
Summary
  • Symbol
    Plekhj1
  • Name
    pleckstrin homology domain containing, family J member 1
  • Synonyms
    9530063M10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925920
    NCBI Gene: 78670
  • Alliance
    gene page
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:80631933-80634404 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 39.72 cM, cytoband C1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    102 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925920
 protein coding gene Chr10:80631933-80634460 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017518
 protein coding gene Chr10:81449098-81451621 (-)
A/J MGP_AJ_G0017496
 protein coding gene Chr10:78587684-78590209 (-)
AKR/J MGP_AKRJ_G0017457
 protein coding gene Chr10:80741796-80744322 (-)
BALB/cJ MGP_BALBcJ_G0017458
 protein coding gene Chr10:78801573-78804096 (-)
C3H/HeJ MGP_C3HHeJ_G0017281
 protein coding gene Chr10:80827260-80829786 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017912
 protein coding gene Chr10:84252748-84255271 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015601
 protein coding gene Chr10:74796755-74799214 (-)
CAST/EiJ MGP_CASTEiJ_G0016848
 protein coding gene Chr10:81055258-81057779 (-)
CBA/J MGP_CBAJ_G0017253
 protein coding gene Chr10:87520507-87523036 (-)
DBA/2J MGP_DBA2J_G0017359
 protein coding gene Chr10:77786419-77788945 (-)
FVB/NJ MGP_FVBNJ_G0017353
 protein coding gene Chr10:77017972-77020501 (-)
LP/J MGP_LPJ_G0017430
 protein coding gene Chr10:81913803-81916327 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017379
 protein coding gene Chr10:89439001-89441527 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017953
 protein coding gene Chr10:80735518-80738044 (-)
PWK/PhJ MGP_PWKPhJ_G0016629
 protein coding gene Chr10:77675170-77677683 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016419
 protein coding gene Chr10:79681215-79683743 (-)
WSB/EiJ MGP_WSBEiJ_G0016908
 protein coding gene Chr10:80769780-80772304 (-)



Homology
more
  • Human Ortholog
    PLEKHJ1, pleckstrin homology domain containing J1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PLEKHJ1, pleckstrin homology domain containing J1
  • Synonyms
    GNRPX
  • Links
    NCBI Gene ID: 55111
    neXtProt AC: NX_Q9NW61
    UniProt: Q9NW61

  • Chr Location
    19p13.3; chr19:2229981-2237704 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    6
  • cDNA Data
    7
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 78670 NCBI Gene Model | MGI Sequence Detail 2472 C57BL/6J ±  kb
transcript NM_023900 RefSeq | MGI Sequence Detail 904 C57BL/6  
polypeptide Q9D240 UniProt | EBI | MGI Sequence Detail 164 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 7
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 12
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory