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D530049I02Rik Gene Detail
Summary
  • Symbol
    D530049I02Rik
  • Name
    RIKEN cDNA D530049I02 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925968
    NCBI Gene: 78718
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr1:73438127-73469938 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    916 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925968
 lncRNA gene Chr1:73438127-73469949 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004872
 lincRNA gene Chr1:73958000-73985316 (+)
A/J MGP_AJ_G0004853
 lincRNA gene Chr1:71370278-71398590 (+)
AKR/J MGP_AKRJ_G0004831
 lincRNA gene Chr1:73354974-73382953 (+)
BALB/cJ MGP_BALBcJ_G0004834
 lincRNA gene Chr1:71433359-71461699 (+)
C3H/HeJ MGP_C3HHeJ_G0004783
 lincRNA gene Chr1:73692114-73719521 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004985
 lincRNA gene Chr1:76837622-76867854 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004412
 lincRNA gene Chr1:66981537-67009626 (+)
CAST/EiJ MGP_CASTEiJ_G0004736
 lincRNA gene Chr1:72995244-73023648 (+)
CBA/J MGP_CBAJ_G0004776
 lincRNA gene Chr1:79338057-79376194 (+)
DBA/2J MGP_DBA2J_G0004794
 lincRNA gene Chr1:70699485-70729792 (+)
FVB/NJ MGP_FVBNJ_G0004814
 lincRNA gene Chr1:69880352-69908799 (+)
LP/J MGP_LPJ_G0004873
 lincRNA gene Chr1:75030005-75064365 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004798
 lincRNA gene Chr1:82751182-82782117 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004989
 lincRNA gene Chr1:73390093-73422620 (+)
PWK/PhJ MGP_PWKPhJ_G0004689
 lincRNA gene Chr1:70153719-70184687 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004615
 lincRNA gene Chr1:72758051-72785034 (+)
WSB/EiJ MGP_WSBEiJ_G0004781
 lincRNA gene Chr1:73209104-73236994 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving D530049I02Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 78718 NCBI Gene Model | MGI Sequence Detail 31812 C57BL/6J ±  kb
transcript NR_040605 RefSeq | MGI Sequence Detail 551 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 12
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:108296 Ginger MR, et al., A noncoding RNA is a potential marker of cell fate during mammary gland development. Proc Natl Acad Sci U S A. 2006 Apr 11;103(15):5781-6
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory