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9530062K07Rik Gene Detail
Summary
  • Symbol
    9530062K07Rik
  • Name
    RIKEN cDNA 9530062K07 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1925989
    NCBI Gene: 78739
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:116176371-116184954 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, cytoband F1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    356 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925989
 lncRNA gene Chr6:116176369-116184954 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004762
 bidirectional promoter lncRNA gene Chr6:118856831-118865420 (-)
A/J MGP_AJ_G0004743
 bidirectional promoter lncRNA gene Chr6:114300985-114309558 (-)
AKR/J MGP_AKRJ_G0004723
 bidirectional promoter lncRNA gene Chr6:117352633-117361302 (-)
BALB/cJ MGP_BALBcJ_G0004725
 bidirectional promoter lncRNA gene Chr6:114108517-114117100 (-)
C3H/HeJ MGP_C3HHeJ_G0004669
 bidirectional promoter lncRNA gene Chr6:66928222-66936887 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004875
 bidirectional promoter lncRNA gene Chr6:121897398-121905977 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0004627
 bidirectional promoter lncRNA gene Chr6:117747594-117756253 (-)
CBA/J MGP_CBAJ_G0004666
 bidirectional promoter lncRNA gene Chr6:126682979-126691648 (-)
DBA/2J MGP_DBA2J_G0004684
 bidirectional promoter lncRNA gene Chr6:113217565-113226176 (-)
FVB/NJ MGP_FVBNJ_G0004703
 bidirectional promoter lncRNA gene Chr6:112407696-112416391 (-)
LP/J MGP_LPJ_G0004763
 bidirectional promoter lncRNA gene Chr6:118867575-118876164 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004688
 bidirectional promoter lncRNA gene Chr6:130836629-130845232 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004878
 bidirectional promoter lncRNA gene Chr6:117386985-117395585 (-)
PWK/PhJ MGP_PWKPhJ_G0004580
 bidirectional promoter lncRNA gene Chr6:112234862-112243867 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004513
 bidirectional promoter lncRNA gene Chr6:116130910-116139475 (-)
WSB/EiJ MGP_WSBEiJ_G0004672
 bidirectional promoter lncRNA gene Chr6:117661907-117670516 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 78739 NCBI Gene Model | MGI Sequence Detail 8584 C57BL/6J ±  kb
transcript NR_131013 RefSeq | MGI Sequence Detail 785 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory