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Spata2l Gene Detail
Summary
  • Symbol
    Spata2l
  • Name
    spermatogenesis associated 2-like
  • Synonyms
    2610039E05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926029
    NCBI Gene: 78779
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:123958994-123962997 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 72.09 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    143 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926029
 protein coding gene Chr8:123956540-123962997 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034248
 protein coding gene Chr8:126833680-126837634 (-)
A/J MGP_AJ_G0034228
 protein coding gene Chr8:121579350-121583325 (-)
AKR/J MGP_AKRJ_G0034155
 protein coding gene Chr8:125109299-125113253 (-)
BALB/cJ MGP_BALBcJ_G0034221
 protein coding gene Chr8:121789849-121793824 (-)
C3H/HeJ MGP_C3HHeJ_G0033932
 protein coding gene Chr8:125812724-125816678 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034741
 protein coding gene Chr8:131077306-131081260 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031683
 protein coding gene Chr8:114399675-114403666 (-)
CAST/EiJ MGP_CASTEiJ_G0033260
 protein coding gene Chr8:125893489-125897441 (-)
CBA/J MGP_CBAJ_G0033905
 protein coding gene Chr8:135886783-135890737 (-)
DBA/2J MGP_DBA2J_G0034061
 protein coding gene Chr8:120757605-120761559 (-)
FVB/NJ MGP_FVBNJ_G0034005
 protein coding gene Chr8:119924485-119928439 (-)
LP/J MGP_LPJ_G0034151
 protein coding gene Chr8:126966522-126970476 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034052
 protein coding gene Chr8:138028666-138032620 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034760
 protein coding gene Chr8:125326393-125330347 (-)
PWK/PhJ MGP_PWKPhJ_G0032961
 protein coding gene Chr8:120589444-120593419 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032801
 protein coding gene Chr8:124041862-124045809 (-)
WSB/EiJ MGP_WSBEiJ_G0033376
 protein coding gene Chr8:126058951-126062905 (-)



Homology
more
  • Human Ortholog
    SPATA2L, spermatogenesis associated 2 like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SPATA2L, spermatogenesis associated 2 like
  • Synonyms
    C16orf76, tamo
  • Links
    NCBI Gene ID: 124044
    neXtProt AC: NX_Q8IUW3
    UniProt: Q8IUW3

  • Chr Location
    16q24.3; chr16:89696357-89701705 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    16
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 78779 NCBI Gene Model | MGI Sequence Detail 4004 C57BL/6J ±  kb
transcript NM_001357300 RefSeq | MGI Sequence Detail 2732 C57BL/6  
polypeptide Q8BNN1 UniProt | EBI | MGI Sequence Detail 426 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000015489 spermatogenesis-associated protein 2-like protein
    (term hierarchy)
  • InterPro Domains
    IPR048839 Spermatogenesis-associated protein 2, PUB-like domain
  • GlyGen
    Q8BNN1 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 5
Other
Accession IDs
less
MGI:2142605
References
more
  • Summaries
    All 25
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory