Smt3h2-ps3 Pseudogene Detail

Summary

• Symbol
  Smt3h2-ps3
• Name
  SMT3 suppressor of mif two 3 homolog 2, pseudogene 3 (S. cerevisiae)

• Feature Type
  pseudogene
• IDs
  MGI:1926285
  NCBI Gene: 108289
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:129500744-129501731 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 77.45 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1926285	pseudogene	Chr10:129500744-129501731 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  1

• NCBI Gene
  108289

Representative Sequences			Length	Strain/Species
genomic	108289	NCBI Gene Model | MGI Sequence Detail	988	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:52460 Chen A, et al., Characterization of mouse ubiquitin-like SMT3A and SMT3B cDNAs and gene/pseudogenes. Biochem Mol Biol Int. 1998 Dec;46(6):1161-74

TSS for Smt3h2-ps3:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr3403	Chr10:129500733-129500738 (+)	-8 bp