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Zfp236 Gene Detail
Summary
  • Symbol
    Zfp236
  • Name
    zinc finger protein 236
  • Synonyms
    LOC240456
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926950
    NCBI Gene: 329002
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:82611718-82711008 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 56.26 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2640 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926950
 protein coding gene Chr18:82611718-82711044 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024602
 protein coding gene Chr18:83635136-83743499 (-)
A/J MGP_AJ_G0024569
 protein coding gene Chr18:79983423-80084855 (-)
AKR/J MGP_AKRJ_G0024540
 protein coding gene Chr18:82348920-82455801 (-)
BALB/cJ MGP_BALBcJ_G0024567
 protein coding gene Chr18:80167806-80266978 (-)
C3H/HeJ MGP_C3HHeJ_G0024336
 protein coding gene Chr18:82462403-82567852 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025014
 protein coding gene Chr18:85698167-85820810 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022445
 protein coding gene Chr18:78745875-78851606 (-)
CAST/EiJ MGP_CASTEiJ_G0023809
 protein coding gene Chr18:82770291-82883860 (-)
CBA/J MGP_CBAJ_G0024306
 protein coding gene Chr18:88889892-89013600 (-)
DBA/2J MGP_DBA2J_G0024436
 protein coding gene Chr18:79503123-79608205 (-)
FVB/NJ MGP_FVBNJ_G0024402
 protein coding gene Chr18:78811479-78910400 (-)
LP/J MGP_LPJ_G0024520
 protein coding gene Chr18:83446565-83552383 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024432
 protein coding gene Chr18:90097062-90205012 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025063
 protein coding gene Chr18:82521567-82631899 (-)
PWK/PhJ MGP_PWKPhJ_G0023554
 protein coding gene Chr18:79887069-79994663 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023360
 protein coding gene Chr18:82635084-82741249 (-)
WSB/EiJ MGP_WSBEiJ_G0023871
 protein coding gene Chr18:82505742-82612346 (-)



Homology
more
  • Human Ortholog
    ZNF236, zinc finger protein 236
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF236, zinc finger protein 236
  • Synonyms
    ZNF236A, ZNF236B
  • Links
    NCBI Gene ID: 7776
    neXtProt AC: NX_Q9UL36
    UniProt: Q9UL36

  • Chr Location
    18q23; chr18:76822557-76972901 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    852
  • Tissues
    146
  • cDNA Data
    13
  • Literature Summary
    5
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000041258 Ensembl Gene Model | MGI Sequence Detail 99291 C57BL/6J ±  kb
    transcript ENSMUST00000182122 Ensembl | MGI Sequence Detail 6059 Not Applicable  
    polypeptide ENSMUSP00000138557 Ensembl | MGI Sequence Detail 1847 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      10 Sequences
    • InterPro Domains
      IPR051643 Transcriptional Regulators with Zinc Finger Domains
      IPR036236 Zinc finger C2H2 superfamily
      IPR013087 Zinc finger C2H2-type
    Molecular
    Reagents
    less
    • All nucleic 15
      cDNA 13
      Primer pair 2

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:2147225, MGI:2685181
    References
    more
    • Summaries
      All 34
      Developmental Gene Expression 5
      Gene Ontology 1
      Phenotypes 8
    • Earliest
      J:91812 Stryke D, et al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Nucleic Acids Res. 2003 Jan 1;31(1):278-81
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory