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Ankrd49 Gene Detail
Summary
  • Symbol
    Ankrd49
  • Name
    ankyrin repeat domain 49
  • Synonyms
    Gbif
  • Feature Type
    protein coding gene
  • IDs
    MGI:1930842
    NCBI Gene: 56503
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:14690916-14695869 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 4.33 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    154 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1930842
 protein coding gene Chr9:14690914-14696152 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034355
 protein coding gene Chr9:11733894-11736649 (-)
A/J MGP_AJ_G0034333
 protein coding gene Chr9:11679660-11682415 (-)
AKR/J MGP_AKRJ_G0034261
 protein coding gene Chr9:11692014-11694769 (-)
BALB/cJ MGP_BALBcJ_G0034327
 protein coding gene Chr9:11453112-11455867 (-)
C3H/HeJ MGP_C3HHeJ_G0034038
 protein coding gene Chr9:11988067-11990822 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034849
 protein coding gene Chr9:12119221-12121976 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031787
 protein coding gene Chr9:10986470-10989222 (-)
CAST/EiJ MGP_CASTEiJ_G0033365
 protein coding gene Chr9:11831159-11833914 (-)
CBA/J MGP_CBAJ_G0034011
 protein coding gene Chr9:12687227-12689982 (-)
DBA/2J MGP_DBA2J_G0034168
 protein coding gene Chr9:11557561-11560316 (-)
FVB/NJ MGP_FVBNJ_G0034113
 protein coding gene Chr9:11150415-11153170 (-)
LP/J MGP_LPJ_G0034254
 protein coding gene Chr9:11835524-11838279 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034157
 protein coding gene Chr9:13728637-13731392 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034868
 protein coding gene Chr9:11698488-11701243 (-)
PWK/PhJ MGP_PWKPhJ_G0033071
 protein coding gene Chr9:11627653-11630409 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032907
 protein coding gene Chr9:11800607-11808431 (-)
WSB/EiJ MGP_WSBEiJ_G0033481
 protein coding gene Chr9:11557263-11560019 (-)



Homology
more
  • Human Ortholog
    ANKRD49, ankyrin repeat domain 49
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ANKRD49, ankyrin repeat domain 49
  • Synonyms
    FGIF, GBIF
  • Links
    NCBI Gene ID: 54851
    neXtProt AC: NX_Q8WVL7
    UniProt: Q8WVL7

  • Chr Location
    11q21; chr11:94493979-94499578 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    5
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    14
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 56503 NCBI Gene Model | MGI Sequence Detail 4954 C57BL/6J ±  kb
transcript NM_001348260 RefSeq | MGI Sequence Detail 2453 C57BL/6  
polypeptide Q8VE42 UniProt | EBI | MGI Sequence Detail 238 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 4
Other
Accession IDs
less
MGI:2143287, MGI:2143429
References
more
  • Summaries
    All 31
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory