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Stx12 Gene Detail
Summary
  • Symbol
    Stx12
  • Name
    syntaxin 12
  • Synonyms
    Stx13, syntaxin 13
  • Feature Type
    protein coding gene
  • IDs
    MGI:1931027
    NCBI Gene: 100226
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
  • Candidate for QTL
    1 QTL
Location &
Maps
more
  • Sequence Map
    Chr4:132581375-132611769 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 66.01 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    778 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1931027
 protein coding gene Chr4:132580812-132611820 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028882
 protein coding gene Chr4:135055206-135089604 (-)
A/J MGP_AJ_G0028841
 protein coding gene Chr4:129424784-129456529 (-)
AKR/J MGP_AKRJ_G0028794
 protein coding gene Chr4:133071863-133104060 (-)
BALB/cJ MGP_BALBcJ_G0028864
 protein coding gene Chr4:130039778-130071102 (-)
C3H/HeJ MGP_C3HHeJ_G0028578
 protein coding gene Chr4:133332373-133363666 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029306
 protein coding gene Chr4:139917903-139948960 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026577
 protein coding gene Chr4:122496016-122527424 (-)
CAST/EiJ MGP_CASTEiJ_G0028011
 protein coding gene Chr4:131405243-131444655 (-)
CBA/J MGP_CBAJ_G0028544
 protein coding gene Chr4:143507481-143540946 (-)
DBA/2J MGP_DBA2J_G0028693
 protein coding gene Chr4:129840452-129872169 (-)
FVB/NJ MGP_FVBNJ_G0028660
 protein coding gene Chr4:128706371-128737375 (-)
LP/J MGP_LPJ_G0028794
 protein coding gene Chr4:135193403-135224321 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028686
 protein coding gene Chr4:148102904-148134948 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029344
 protein coding gene Chr4:133489943-133524063 (-)
PWK/PhJ MGP_PWKPhJ_G0027732
 protein coding gene Chr4:126539658-126571185 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027558
 protein coding gene Chr4:129324759-129358674 (-)
WSB/EiJ MGP_WSBEiJ_G0028091
 protein coding gene Chr4:133658800-133694844 (-)



Homology
more
  • Human Ortholog
    STX12, syntaxin 12
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    STX12, syntaxin 12
  • Synonyms
    STX13, STX14
  • Links
    NCBI Gene ID: 23673
    neXtProt AC: NX_Q86Y82
    UniProt: Q86Y82

  • Chr Location
    1p35.3; chr1:27773219-27824443 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    52
  • GO References
    11
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    913
  • Tissues
    103
  • cDNA Data
    15
  • Literature Summary
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100226 NCBI Gene Model | MGI Sequence Detail 30395 C57BL/6J ±  kb
transcript NM_133887 RefSeq | MGI Sequence Detail 2883 C57BL/6  
polypeptide Q9ER00 UniProt | EBI | MGI Sequence Detail 274 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 15
    Other 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:2140384, MGI:2140479
References
more
  • Summaries
    All 51
    Developmental Gene Expression 6
    Gene Ontology 11
    Phenotypes 9
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:345844 Guo Y, et al., Docking protein 6 (DOK6) selectively docks the neurotrophic signaling transduction to restrain peripheral neuropathy. Signal Transduct Target Ther. 2024 Feb 14;9(1):32
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory