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Selenok Gene Detail
Summary
  • Symbol
    Selenok
  • Name
    selenoprotein K
  • Synonyms
    1110001C03Rik, 30kDa, HSPC030, Selk
  • Feature Type
    protein coding gene
  • IDs
    MGI:1931466
    NCBI Gene: 80795
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:29690337-29697031 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 14, 18.36 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    307 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1931466
protein coding gene Chr14:29690265-29697619 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021098
protein coding gene Chr14:23072209-23080891 (+)
A/J MGP_AJ_G0021046
protein coding gene Chr14:22201584-22208350 (+)
AKR/J MGP_AKRJ_G0021023
protein coding gene Chr14:23287461-23294227 (+)
BALB/cJ MGP_BALBcJ_G0021050
protein coding gene Chr14:22293454-22300485 (+)
C3H/HeJ MGP_C3HHeJ_G0020833
protein coding gene Chr14:23151491-23158257 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021482
protein coding gene Chr14:23991437-23998203 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019045
protein coding gene Chr14:22273501-22280153 (+)
CAST/EiJ MGP_CASTEiJ_G0020358
protein coding gene Chr14:22871807-22880086 (+)
CBA/J MGP_CBAJ_G0020800
protein coding gene Chr14:24914520-24921286 (+)
DBA/2J MGP_DBA2J_G0020922
protein coding gene Chr14:22245366-22252132 (+)
FVB/NJ MGP_FVBNJ_G0020906
protein coding gene Chr14:22193443-22200209 (+)
LP/J MGP_LPJ_G0020991
protein coding gene Chr14:23387045-23393811 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020932
protein coding gene Chr14:24226661-24233425 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021515
protein coding gene Chr14:23051265-23058031 (+)
PWK/PhJ MGP_PWKPhJ_G0020106
protein coding gene Chr14:21669190-21676229 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019930
protein coding gene Chr14:22613700-22620412 (+)
WSB/EiJ MGP_WSBEiJ_G0020413
protein coding gene Chr14:23108866-23115654 (+)



Homology
more
  • Human Ortholog
    SELENOK, selenoprotein K
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SELENOK, selenoprotein K
  • Synonyms
    HSPC030, HSPC297, SELK
  • Links
    NCBI Gene ID: 58515
    neXtProt AC: NX_Q9Y6D0
    UniProt: Q9Y6D0

  • Chr Location
    3p21.1; chr3:53884417-53891885 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotypes from 3 alleles in 3 genetic backgrounds
    20 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit impaired T cell, neutrophil, and macrophage calcium flux and increased susceptibility to viral infection.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 80795 NCBI Gene Model | MGI Sequence Detail 6695 C57BL/6J ±  kb
    transcript NM_019979 RefSeq | MGI Sequence Detail 1018 C57BL/6  
    polypeptide Q9JLJ1 UniProt | EBI | MGI Sequence Detail 94 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 110
      cDNA 110

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:1913387, MGI:2145576
    References
    more
    • Summaries
      All 52
      Developmental Gene Expression 4
      Gene Ontology 9
      Phenotypes 20
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:349300 Ouyang P, et al., SELENOK-dependent CD36 palmitoylation regulates microglial functions and Abeta phagocytosis. Redox Biol. 2024 Feb 1;70:103064

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    last database update
    11/12/2024
    MGI 6.24
    The Jackson Laboratory