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Mrpl9 Gene Detail
Summary
  • Symbol
    Mrpl9
  • Name
    mitochondrial ribosomal protein L9
  • Synonyms
    8030480E20Rik, C330013D18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2137211
    NCBI Gene: 78523
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:94350631-94355831 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 40.68 cM, cytoband F2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    186 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2137211
 protein coding gene Chr3:94350625-94358437 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027551
 protein coding gene Chr3:95016564-95026461 (+)
A/J MGP_AJ_G0027510
 protein coding gene Chr3:92126839-92134644 (+)
AKR/J MGP_AKRJ_G0027478
 protein coding gene Chr3:94219343-94227156 (+)
BALB/cJ MGP_BALBcJ_G0027521
 protein coding gene Chr3:91829115-91836927 (+)
C3H/HeJ MGP_C3HHeJ_G0027257
 protein coding gene Chr3:94517057-94528150 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027970
 protein coding gene Chr3:98607191-98614989 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025312
 protein coding gene Chr3:88620013-88627956 (+)
CAST/EiJ MGP_CASTEiJ_G0026705
 protein coding gene Chr3:93862932-93871302 (+)
CBA/J MGP_CBAJ_G0027233
 protein coding gene Chr3:102100067-102107871 (+)
DBA/2J MGP_DBA2J_G0027372
 protein coding gene Chr3:91392252-91400054 (+)
FVB/NJ MGP_FVBNJ_G0027342
 protein coding gene Chr3:89490560-89498373 (+)
LP/J MGP_LPJ_G0027480
 protein coding gene Chr3:96325525-96333319 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027369
 protein coding gene Chr3:108333646-108342111 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028024
 protein coding gene Chr3:93899280-93907095 (+)
PWK/PhJ MGP_PWKPhJ_G0026433
 protein coding gene Chr3:91280099-91287896 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026254
 protein coding gene Chr3:92241719-92249451 (+)
WSB/EiJ MGP_WSBEiJ_G0026788
 protein coding gene Chr3:94248496-94256238 (+)



Homology
more
  • Human Ortholog
    MRPL9, mitochondrial ribosomal protein L9
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MRPL9, mitochondrial ribosomal protein L9
  • Synonyms
    bL9m, L9mt
  • Links
    NCBI Gene ID: 65005
    neXtProt AC: NX_Q9BYD2
    UniProt: Q9BYD2

  • Chr Location
    1q21.3; chr1:151759647-151763496 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    2 involving Mrpl9
  • Incidental Mutations
    Mutagenetix , APF
  • Find Mice (IMSR)
    19 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    720
  • Tissues
    13
  • cDNA Data
    60
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 78523 NCBI Gene Model | MGI Sequence Detail 5201 C57BL/6J ±  kb
transcript NM_030116 RefSeq | MGI Sequence Detail 1429 C57BL/6  
polypeptide Q99N94 UniProt | EBI | MGI Sequence Detail 265 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000010617 large ribosomal subunit protein bL9m
    (term hierarchy)
  • InterPro Domains
    IPR000244 Large ribosomal subunit protein bL9
    IPR020070 Large ribosomal subunit protein bL9, N-terminal
    IPR036935 Large ribosomal subunit protein bL9, N-terminal domain superfamily
    IPR009027 Large ribosomal subunit protein bL9/RNase H1, N-terminal
  • GlyGen
    Q99N94 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 61
    cDNA 60
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1924795, MGI:1925773, MGI:2139570
References
more
  • Summaries
    All 39
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 8
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:297050 Cheong A, et al., Expression analysis of mammalian mitochondrial ribosomal protein genes. Gene Expr Patterns. 2020 Sep 25;38:119147
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory