Bahd1 MGI Mouse Gene Detail - MGI:2139371 - bromo adjacent homology domain containing 1

Symbol

Bahd1
Name

bromo adjacent homology domain containing 1
Synonyms

LOC228536, mKIAA0945

Feature Type

protein coding gene
IDs

MGI:2139371
NCBI Gene: 228536
Alliance

gene page
Transcription Start Sites

5 TSS

Sequence Map

Chr2:118730858-118755009 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 2, 59.72 cM
Mapping Data

2 experiments

SNPs within 2kb

342 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2139371	protein coding gene	Chr2:118730817-118755009 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0026326	protein coding gene	Chr2:121613201-121643563 (+)
A/J	MGP_AJ_G0026287	protein coding gene	Chr2:116669347-116693375 (+)
AKR/J	MGP_AKRJ_G0026266	protein coding gene	Chr2:119938814-119962935 (+)
BALB/cJ	MGP_BALBcJ_G0026300	protein coding gene	Chr2:116933451-116958313 (+)
C3H/HeJ	MGP_C3HHeJ_G0026046	protein coding gene	Chr2:120406642-120432013 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0026747	protein coding gene	Chr2:125618148-125642110 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0024127	protein coding gene	Chr2:111720865-111744999 (+)
CAST/EiJ	MGP_CASTEiJ_G0025508	protein coding gene	Chr2:120710251-120734404 (+)
CBA/J	MGP_CBAJ_G0026022	protein coding gene	Chr2:130048304-130075090 (+)
DBA/2J	MGP_DBA2J_G0026161	protein coding gene	Chr2:116098314-116122483 (+)
FVB/NJ	MGP_FVBNJ_G0026123	protein coding gene	Chr2:114919680-114943748 (+)
LP/J	MGP_LPJ_G0026262	protein coding gene	Chr2:121936561-121960718 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0026142	protein coding gene	Chr2:134410537-134437454 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0026802	protein coding gene	Chr2:120062456-120086642 (+)
PWK/PhJ	MGP_PWKPhJ_G0025244	protein coding gene	Chr2:115650840-115675673 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0025043	protein coding gene	Chr2:119243066-119267822 (+)
WSB/EiJ	MGP_WSBEiJ_G0025577	protein coding gene	Chr2:120888661-120914283 (+)

Human Ortholog

BAHD1, bromo adjacent homology domain containing 1

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

BAHD1, bromo adjacent homology domain containing 1
Links

HGNC:29153

NCBI Gene ID: 22893

neXtProt AC: NX_Q8TBE0

UniProt: Q8TBE0
Chr Location

15q15.1; chr15:40437452-40468236 (+) GRCh38

MGI Vertebrate Homology

Bahd1 stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: BAHD1
Gene Tree

Bahd1

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Phenotype Summary

13 phenotypes from 2 alleles in 2 genetic backgrounds
16 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

14
Chemically induced (other)

1
Endonuclease-mediated

4
Gene trapped

2
Radiation induced

1
Targeted

6
Genomic Mutations

2 involving Bahd1
Incidental Mutations

Mutagenetix , APF , CvDC
Find Mice (IMSR)

37 strains or lines available

Mice homozygous for a knock-out allele exhibit decreased susceptibility to bacterial infection.

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All GO Annotations

15
GO References

4

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

706
cDNA Data

8

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase bahd1

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All Sequences

58
RefSeq

16
UniProt

3
CCDS

CCDS38202.1

Ensembl

ENSMUSG00000040007 (Evidence)
NCBI Gene

228536

			Length	Strain/Species	Flank
genomic	ENSMUSG00000040007	Ensembl Gene Model \| MGI Sequence Detail	24152	C57BL/6J	± kb
transcript	ENSMUST00000036578	Ensembl \| MGI Sequence Detail	4594	Not Applicable
polypeptide	ENSMUSP00000043130	Ensembl \| MGI Sequence Detail	772	Not Applicable

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UniProt

3 Sequences
Protein Ontology

PR:000031807 bromo adjacent homology domain-containing 1 protein

(term hierarchy)
InterPro Domains

IPR001025 Bromo adjacent homology (BAH) domain

IPR043151 Bromo adjacent homology (BAH) domain superfamily

IPR053032 Bromo adjacent homology domain-containing protein

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All nucleic 8

cDNA 8

Microarray probesets 3

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MGI:2139129, MGI:2684963

Summaries

All 38

Gene Ontology 4

Phenotypes 16
Earliest

J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Latest

J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

TSS for Bahd1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr19587	Chr2:118730860-118730878 (+)	11 bp
Tssr19588	Chr2:118731862-118731884 (+)	1,015 bp
Tssr19589	Chr2:118731909-118731969 (+)	1,081 bp
Tssr19590	Chr2:118732070-118732098 (+)	1,226 bp
Tssr19591	Chr2:118732102-118732144 (+)	1,265 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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