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Bmt2 Gene Detail
Summary
  • Symbol
    Bmt2
  • Name
    base methyltransferase of 25S rRNA 2
  • Synonyms
    B630005N14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2141466
    NCBI Gene: 101148
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:13625674-13677965 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 5.69 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1370 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2141466
 protein coding gene Chr6:13625672-13677965 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030460
 protein coding gene Chr6:10704273-10759819 (-)
A/J MGP_AJ_G0030433
 protein coding gene Chr6:10288833-10359326 (-)
AKR/J MGP_AKRJ_G0030360
 protein coding gene Chr6:10649219-10700643 (-)
BALB/cJ MGP_BALBcJ_G0030442
 protein coding gene Chr6:10280991-10335971 (-)
C3H/HeJ MGP_C3HHeJ_G0030156
 protein coding gene Chr6:10541429-10601580 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030897
 protein coding gene Chr6:11103549-11158736 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028108
 protein coding gene Chr6:9494476-9546251 (-)
CAST/EiJ MGP_CASTEiJ_G0029558
 protein coding gene Chr6:10403250-10465694 (-)
CBA/J MGP_CBAJ_G0030134
 protein coding gene Chr6:11389133-11454034 (-)
DBA/2J MGP_DBA2J_G0030278
 protein coding gene Chr6:10218290-10281670 (-)
FVB/NJ MGP_FVBNJ_G0030232
 protein coding gene Chr6:10126127-10178962 (-)
LP/J MGP_LPJ_G0030365
 protein coding gene Chr6:10659142-10713751 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030268
 protein coding gene Chr6:12161143-12237161 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030927
 protein coding gene Chr6:10534419-10591373 (-)
PWK/PhJ MGP_PWKPhJ_G0029272
 protein coding gene Chr6:9925171-9975746 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029108
 protein coding gene Chr6:10418706-10479846 (-)
WSB/EiJ MGP_WSBEiJ_G0029634
 protein coding gene Chr6:10470857-10527358 (-)



Homology
more
  • Human Ortholog
    SAMTOR, S-adenosylmethionine sensor upstream of mTORC1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SAMTOR, S-adenosylmethionine sensor upstream of mTORC1
  • Synonyms
    BMT2, C7orf60
  • Links
    NCBI Gene ID: 154743
    neXtProt AC: NX_Q1RMZ1
    UniProt: Q1RMZ1

  • Chr Location
    7q31.1; chr7:112819147-112939875 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    47
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 101148 NCBI Gene Model | MGI Sequence Detail 52292 C57BL/6J ±  kb
transcript NM_175312 RefSeq | MGI Sequence Detail 4147 C57BL/6  
polypeptide Q8BXK4 UniProt | EBI | MGI Sequence Detail 403 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000060148 S-adenosylmethionine sensor upstream of mTORC1
    (term hierarchy)
  • EC
    2.1.1.-
  • InterPro Domains
    IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily
    IPR021867 S-adenosylmethionine-dependent methyltransferase Bmt2-like
Molecular
Reagents
less
  • All nucleic 47
    cDNA 47

    Microarray probesets 4
References
more
  • Summaries
    All 31
    Gene Ontology 6
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory