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Cfap100 Gene Detail
Summary
  • Symbol
    Cfap100
  • Name
    cilia and flagella associated protein 100
  • Synonyms
    C030041G11Rik, C230069K22Rik, Ccdc37
  • Feature Type
    protein coding gene
  • IDs
    MGI:2141635
    NCBI Gene: 243538
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:90380461-90405779 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 40.16 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    643 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2141635
 protein coding gene Chr6:90380461-90412379 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031037
 protein coding gene Chr6:91930960-91958834 (-)
A/J MGP_AJ_G0031005
 protein coding gene Chr6:88441315-88467242 (-)
AKR/J MGP_AKRJ_G0030937
 protein coding gene Chr6:90909110-90940178 (-)
BALB/cJ MGP_BALBcJ_G0031017
 protein coding gene Chr6:88386329-88413728 (-)
C3H/HeJ MGP_C3HHeJ_G0030691
 protein coding gene Chr6:93504617-93531262 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031476
 protein coding gene Chr6:94359404-94386356 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028645
 protein coding gene Chr6:86430817-86458632 (-)
CAST/EiJ MGP_CASTEiJ_G0030124
 protein coding gene Chr6:91021021-91048151 (-)
CBA/J MGP_CBAJ_G0030703
 protein coding gene Chr6:97891318-97919138 (-)
DBA/2J MGP_DBA2J_G0030856
 protein coding gene Chr6:87635871-87661595 (-)
FVB/NJ MGP_FVBNJ_G0030810
 protein coding gene Chr6:86836620-86861996 (-)
LP/J MGP_LPJ_G0030936
 protein coding gene Chr6:91914316-91941988 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030844
 protein coding gene Chr6:101977413-102003138 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031503
 protein coding gene Chr6:90753541-90780432 (-)
PWK/PhJ MGP_PWKPhJ_G0029840
 protein coding gene Chr6:86579210-86604980 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029669
 protein coding gene Chr6:89646447-89673257 (-)
WSB/EiJ MGP_WSBEiJ_G0030208
 protein coding gene Chr6:91216400-91243022 (-)



Homology
more
  • Human Ortholog
    CFAP100, cilia and flagella associated protein 100
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CFAP100, cilia and flagella associated protein 100
  • Synonyms
    CCDC37, MIA1
  • Links
    NCBI Gene ID: 348807
    neXtProt AC: NX_Q494V2
    UniProt: Q494V2

  • Chr Location
    3q21.3; chr3:126394909-126436556 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    716
  • Tissues
    10
  • cDNA Data
    8
  • Literature Summary
    2
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048794 Ensembl Gene Model | MGI Sequence Detail 25319 C57BL/6J ±  kb
transcript ENSMUST00000165673 Ensembl | MGI Sequence Detail 2072 Not Applicable  
polypeptide ENSMUSP00000126515 Ensembl | MGI Sequence Detail 613 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • Protein Ontology
    PR:000029328 cilia- and flagella-associated protein 100
    (term hierarchy)
  • InterPro Domains
    IPR051147 Cilia- and flagella-associated domain-containing protein
    IPR025252 Domain of unknown function DUF4200
Molecular
Reagents
less
  • All nucleic 9
    cDNA 8
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:1924784
References
more
  • Summaries
    All 36
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 14
  • Earliest
    J:21726 Champion KM, et al., Identification of a heritable deficiency of the folate-dependent enzyme 10-formyltetrahydrofolate dehydrogenase in mice. Proc Natl Acad Sci U S A. 1994 Nov 22;91(24):11338-42
  • Latest
    J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory