AA672651 Gene Detail

Summary

• Symbol
  AA672651
• Name
  expressed sequence AA672651

• Feature Type
  lncRNA gene
• IDs
  MGI:2142438
  NCBI Gene: 101969
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:86065972-86066901 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 41.61 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  149 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2142438	lncRNA gene	Chr8:86065972-86066901 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004572	antisense lncRNA gene	Chr8:86266163-86266586 (+)
A/J	MGP_AJ_G0004552	antisense lncRNA gene	Chr8:82865336-82865759 (+)
AKR/J	MGP_AKRJ_G0004536	antisense lncRNA gene	Chr8:85329367-85329790 (+)
BALB/cJ	MGP_BALBcJ_G0004537	antisense lncRNA gene	Chr8:83009574-83009997 (+)
C3H/HeJ	MGP_C3HHeJ_G0004486	antisense lncRNA gene	Chr8:85962426-85962849 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004686	antisense lncRNA gene	Chr8:89611849-89612272 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004137	antisense lncRNA gene	Chr8:76656383-76657250 (+)
CAST/EiJ	MGP_CASTEiJ_G0004445	antisense lncRNA gene	Chr8:85378544-85380822 (+)
CBA/J	MGP_CBAJ_G0004480	antisense lncRNA gene	Chr8:92627339-92627762 (+)
DBA/2J	MGP_DBA2J_G0004496	antisense lncRNA gene	Chr8:82513928-82514351 (+)
FVB/NJ	MGP_FVBNJ_G0004512	antisense lncRNA gene	Chr8:81456995-81458255 (+)
LP/J	MGP_LPJ_G0004576	antisense lncRNA gene	Chr8:86378533-86382637 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004501	antisense lncRNA gene	Chr8:95171686-95177315 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004686	antisense lncRNA gene	Chr8:85335278-85336180 (+)
PWK/PhJ	MGP_PWKPhJ_G0004397	antisense lncRNA gene	Chr8:81756486-81757354 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004338	antisense lncRNA gene	Chr8:84128553-84129414 (+)
WSB/EiJ	MGP_WSBEiJ_G0004485	antisense lncRNA gene	Chr8:85754021-85754444 (+)

Homology

• Gene Tree
  AA672651
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving AA672651
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000084895 (Evidence)
• NCBI Gene
  101969

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084895	Ensembl Gene Model | MGI Sequence Detail	930	C57BL/6J
transcript	ENSMUST00000151550	Ensembl | MGI Sequence Detail	489	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;