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Slc22a13 Gene Detail
Summary
  • Symbol
    Slc22a13
  • Name
    solute carrier family 22 (organic cation transporter), member 13
  • Synonyms
    OCTL1, OCTL3, ORCTL3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2143107
    NCBI Gene: 102570
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:119022040-119038164 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 71.33 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    523 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2143107
 protein coding gene Chr9:119020618-119038171 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0035395
 protein coding gene Chr9:117410492-117426814 (-)
AKR/J MGP_AKRJ_G0035328
 protein coding gene Chr9:120465597-120485430 (-)
BALB/cJ MGP_BALBcJ_G0035391
 protein coding gene Chr9:117312891-117325474 (-)
C3H/HeJ MGP_C3HHeJ_G0035099
 protein coding gene Chr9:120924124-120942739 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035914
 protein coding gene Chr9:125274381-125294250 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032796
 protein coding gene Chr9:114605314-114623028 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0035066
 protein coding gene Chr9:129971758-129989830 (-)
DBA/2J MGP_DBA2J_G0035225
 protein coding gene Chr9:116849182-116867054 (-)
FVB/NJ MGP_FVBNJ_G0035172
 protein coding gene Chr9:115698229-115715644 (-)
LP/J MGP_LPJ_G0035304
 protein coding gene Chr9:122265357-122281171 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035213
 protein coding gene Chr9:130985920-130990434 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035933
 protein coding gene Chr9:120876662-120890755 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0033944
 protein coding gene Chr9:120961830-120978154 (-)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    SLC22A13, solute carrier family 22 member 13
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC22A13, solute carrier family 22 member 13
  • Synonyms
    OAT10, OCTL1, OCTL3, ORCTL-3, ORCTL3
  • Links
    NCBI Gene ID: 9390
    neXtProt AC: NX_Q9Y226
    UniProt: Q9Y226

  • Chr Location
    3p22.2; chr3:38265812-38278757 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    991
  • Tissues
    163
  • cDNA Data
    20
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074028 Ensembl Gene Model | MGI Sequence Detail 16125 C57BL/6J ±  kb
transcript ENSMUST00000084797 Ensembl | MGI Sequence Detail 2001 Not Applicable  
polypeptide ENSMUSP00000081855 Ensembl | MGI Sequence Detail 551 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR005828 Major facilitator, sugar transporter-like
    IPR020846 Major facilitator superfamily domain
    IPR036259 MFS transporter superfamily
    IPR005829 Sugar transporter, conserved site
  • GlyGen
    Q6A4L0 4 sites
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 3
References
more
  • Summaries
    All 30
    Developmental Gene Expression 4
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
  • Latest
    J:326328 Shinoda Y, et al., Functional characterization of human organic anion transporter 10 (OAT10/SLC22A13) as an orotate transporter. Drug Metab Pharmacokinet. 2022 Apr;43:100443
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory