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Arhgap9 Gene Detail
Summary
  • Symbol
    Arhgap9
  • Name
    Rho GTPase activating protein 9
  • Feature Type
    protein coding gene
  • IDs
    MGI:2143764
    NCBI Gene: 216445
  • Alliance
    gene page
  • Transcription Start Sites
    16 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:127157833-127165812 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 74.50 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    264 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2143764
 protein coding gene Chr10:127157829-127165816 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017818
 protein coding gene Chr10:130916132-130921761 (+)
A/J MGP_AJ_G0017793
 protein coding gene Chr10:125678059-125684264 (+)
AKR/J MGP_AKRJ_G0017756
 protein coding gene Chr10:129387850-129394051 (+)
BALB/cJ MGP_BALBcJ_G0017757
 protein coding gene Chr10:126083208-126089418 (+)
C3H/HeJ MGP_C3HHeJ_G0017581
 protein coding gene Chr10:129540661-129546870 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018212
 protein coding gene Chr10:135351829-135358025 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015892
 protein coding gene Chr10:119674229-119682083 (+)
CAST/EiJ MGP_CASTEiJ_G0017141
 protein coding gene Chr10:130196832-130203054 (+)
CBA/J MGP_CBAJ_G0017550
 protein coding gene Chr10:140807550-140813759 (+)
DBA/2J MGP_DBA2J_G0017656
 protein coding gene Chr10:124761749-124767964 (+)
FVB/NJ MGP_FVBNJ_G0017651
 protein coding gene Chr10:123704488-123710672 (+)
LP/J MGP_LPJ_G0017730
 protein coding gene Chr10:131488571-131495875 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017679
 protein coding gene Chr10:143508134-143514343 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018252
 protein coding gene Chr10:129451584-129457820 (+)
PWK/PhJ MGP_PWKPhJ_G0016926
 protein coding gene Chr10:124965783-124972242 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016718
 protein coding gene Chr10:128491653-128498170 (+)
WSB/EiJ MGP_WSBEiJ_G0017202
 protein coding gene Chr10:129685482-129691667 (+)



Homology
more
  • Human Ortholog
    ARHGAP9, Rho GTPase activating protein 9
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ARHGAP9, Rho GTPase activating protein 9
  • Synonyms
    10C, RGL1
  • Links
    NCBI Gene ID: 64333
    neXtProt AC: NX_Q9BRR9
    UniProt: Q9BRR9

  • Chr Location
    12q13.3; chr12:57472264-57488824 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    1
  • cDNA Data
    13
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040345 Ensembl Gene Model | MGI Sequence Detail 7980 C57BL/6J ±  kb
transcript ENSMUST00000219511 Ensembl | MGI Sequence Detail 2217 Not Applicable  
polypeptide ENSMUSP00000151690 Ensembl | MGI Sequence Detail 648 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 7
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory