D930048N14Rik Gene Detail

Summary

• Symbol
  D930048N14Rik
• Name
  RIKEN cDNA D930048N14 gene

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:2144709
  NCBI Gene: 97775
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:51541781-51548508 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 31.20 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  237 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2144709	protein coding gene	Chr11:51541781-51548508 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0018273	protein coding gene	Chr11:50903786-50910502 (+)
A/J	MGP_AJ_G0018242	protein coding gene	Chr11:48988395-48995127 (+)
AKR/J	MGP_AKRJ_G0018212	protein coding gene	Chr11:50524966-50531691 (+)
BALB/cJ	MGP_BALBcJ_G0018213	protein coding gene	Chr11:49282593-49289292 (+)
C3H/HeJ	MGP_C3HHeJ_G0018024	protein coding gene	Chr11:50558381-50565734 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0018663	protein coding gene	Chr11:52446585-52454129 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0016315	protein coding gene	Chr11:46551809-46557320 (+)
CAST/EiJ	MGP_CASTEiJ_G0017588	protein coding gene	Chr11:50548768-50557183 (+)
CBA/J	MGP_CBAJ_G0017999	protein coding gene	Chr11:54900797-54907942 (+)
DBA/2J	MGP_DBA2J_G0018106	protein coding gene	Chr11:48696743-48703461 (+)
FVB/NJ	MGP_FVBNJ_G0018101	protein coding gene	Chr11:48405803-48413925 (+)
LP/J	MGP_LPJ_G0018182	protein coding gene	Chr11:51325680-51332281 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0018124	protein coding gene	Chr11:56312516-56319188 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0018706	protein coding gene	Chr11:50622348-50629032 (+)
PWK/PhJ	MGP_PWKPhJ_G0017364	protein coding gene	Chr11:49213739-49220559 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0017159	protein coding gene	Chr11:50356454-50365145 (+)
WSB/EiJ	MGP_WSBEiJ_G0017636	protein coding gene	Chr11:50276393-50283065 (+)

Homology

• Gene Tree
  D930048N14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  1
• Gene trapped
  4
• Targeted
  1
• Genomic Mutations
  1 involving D930048N14Rik
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  16 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  20

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  34
• RefSeq
  1
• UniProt
  2

• Ensembl
  ENSMUSG00000052563 (Evidence)
• NCBI Gene
  97775

Representative Sequences			Length	Strain/Species
genomic	97775	NCBI Gene Model | MGI Sequence Detail	6728	C57BL/6J
transcript	NR_027958	RefSeq | MGI Sequence Detail	3452	C57BL/6
polypeptide	Q8C369	UniProt | EBI | MGI Sequence Detail	160	Not Applicable

Protein
Information

• UniProt
  2 Sequences

Molecular
Reagents

• All nucleic 20

  cDNA 20

  
  

  Microarray probesets 6

Other
Accession IDs

MGI:2144111

References

• Summaries
  All 24

  Phenotypes 6
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:267911 Timmermans S, et al., Overview of inactivating mutations in the protein-coding genome of the mouse reference strain C57BL/6J. JCI Insight. 2018 Jul 12;3(13)

TSS for D930048N14Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr101288	Chr11:51541728-51541822 (+)	-6 bp