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Vmac Gene Detail
Summary
  • Symbol
    Vmac
  • Name
    vimentin-type intermediate filament associated coiled-coil protein
  • Feature Type
    protein coding gene
  • IDs
    MGI:2146912
    NCBI Gene: 106639
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:57020936-57024688 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 29.47 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    162 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2146912
 protein coding gene Chr17:57020936-57025022 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023935
 protein coding gene Chr17:58427021-58430810 (-)
A/J MGP_AJ_G0023893
 protein coding gene Chr17:56829236-56833002 (-)
AKR/J MGP_AKRJ_G0023862
 protein coding gene Chr17:57534518-57538284 (-)
BALB/cJ MGP_BALBcJ_G0023894
 protein coding gene Chr17:56647429-56651199 (-)
C3H/HeJ MGP_C3HHeJ_G0023658
 protein coding gene Chr17:58268221-58272983 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024340
 protein coding gene Chr17:60690762-60694551 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021786
 protein coding gene Chr17:53302596-53306376 (-)
CAST/EiJ MGP_CASTEiJ_G0023140
 protein coding gene Chr17:58544140-58547880 (-)
CBA/J MGP_CBAJ_G0023634
 protein coding gene Chr17:63069364-63076639 (-)
DBA/2J MGP_DBA2J_G0023762
 protein coding gene Chr17:55528564-55532639 (-)
FVB/NJ MGP_FVBNJ_G0023728
 protein coding gene Chr17:55081555-55086571 (-)
LP/J MGP_LPJ_G0023844
 protein coding gene Chr17:59116068-59121691 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023756
 protein coding gene Chr17:62547064-62553180 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024384
 protein coding gene Chr17:57900516-57906724 (-)
PWK/PhJ MGP_PWKPhJ_G0022886
 protein coding gene Chr17:54887689-54891610 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022697
 protein coding gene Chr17:54665122-54668877 (-)
WSB/EiJ MGP_WSBEiJ_G0023206
 protein coding gene Chr17:58513704-58519123 (-)



Homology
more
  • Human Ortholog
    VMAC, vimentin type intermediate filament associated coiled-coil protein
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VMAC, vimentin type intermediate filament associated coiled-coil protein
  • Links
    NCBI Gene ID: 400673
    neXtProt AC: NX_Q2NL98
    UniProt: Q2NL98

  • Chr Location
    19p13.3; chr19:5904872-5910853 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    41
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 106639 NCBI Gene Model | MGI Sequence Detail 3753 C57BL/6J ±  kb
transcript NM_178926 RefSeq | MGI Sequence Detail 2091 C57BL/6  
polypeptide Q8BP01 UniProt | EBI | MGI Sequence Detail 174 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 41
    cDNA 41

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Gene Ontology 3
    Phenotypes 2
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory