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Zfp979 Gene Detail
Summary
  • Symbol
    Zfp979
  • Name
    zinc finger protein 979
  • Synonyms
    2610305D13Rik, Ssm1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2148252
    NCBI Gene: 112422
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:147696394-147726970 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, Syntenic
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    54 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2148252
 protein coding gene Chr4:147696393-147727004 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029104
 protein coding gene Chr4:151288580-151293824 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0028807
 protein coding gene Chr4:149511522-149519467 (-)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0028769
 protein coding gene Chr4:161267183-161271357 (-)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0028882
 protein coding gene Chr4:144198834-144206188 (-)
LP/J MGP_LPJ_G0029008
 protein coding gene Chr4:151199232-151205406 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028909
 protein coding gene Chr4:164651657-164662983 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0028300
 protein coding gene Chr4:149551968-149581334 (-)



Homology
more
  • Human Ortholog
    ZNF616, zinc finger protein 616
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF616, zinc finger protein 616
  • Links
    NCBI Gene ID: 90317
    neXtProt AC: NX_Q08AN1
    UniProt: Q08AN1

  • Chr Location
    19q13.41; chr19:52113091-52139938 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    752
  • Tissues
    27
  • cDNA Data
    12
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000066000 Ensembl Gene Model | MGI Sequence Detail 30577 C57BL/6J ±  kb
transcript ENSMUST00000105720 Ensembl | MGI Sequence Detail 2594 Not Applicable  
polypeptide ENSMUSP00000101345 Ensembl | MGI Sequence Detail 407 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 12
    Primer pair 3

    Microarray probesets 2
Other
Accession IDs
less
MGD-MRK-14610, MGD-MRK-14611, MGI:98425
References
more
  • Summaries
    All 40
    Developmental Gene Expression 4
    Gene Ontology 1
    Phenotypes 13
  • Earliest
    J:11225 Engler P, et al., A strain-specific modifier on mouse chromosome 4 controls the methylation of independent transgene loci. Cell. 1991 Jun 14;65(6):939-47
  • Latest
    J:306329 Ratnam S, et al., Ssm1b expression and function in germ cells of adult mice and in early embryos. Mol Reprod Dev. 2017 Jul;84(7):596-613
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory