4930519F09Rik Pseudogene Detail

Summary

• Symbol
  4930519F09Rik
• Name
  RIKEN cDNA 4930519F09 gene

• Feature Type
  pseudogene
• IDs
  MGI:2149783
  NCBI Gene: 114676
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:28797953-28799503 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 16.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  184 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2149783	pseudogene	Chr10:28797631-28799563 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039652	pseudogene	Chr10:27040637-27083966 (-)
A/J	MGP_AJ_G0039651	pseudogene	Chr10:26212038-26258679 (-)
AKR/J	MGP_AKRJ_G0039575	pseudogene	Chr10:26634904-26677463 (-)
BALB/cJ	MGP_BALBcJ_G0039625	pseudogene	Chr10:26319381-26356928 (-)
C3H/HeJ	MGP_C3HHeJ_G0039288	pseudogene	Chr10:26865022-26910168 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040177	pseudogene	Chr10:27839712-27882058 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038405	pseudogene	Chr10:26940289-26979849 (-)
CBA/J	MGP_CBAJ_G0039255	pseudogene	Chr10:29181409-29224360 (-)
DBA/2J	MGP_DBA2J_G0039448	pseudogene	Chr10:25923672-25969880 (-)
FVB/NJ	MGP_FVBNJ_G0039403	pseudogene	Chr10:25555732-25599426 (-)
LP/J	MGP_LPJ_G0039490	pseudogene	Chr10:27015835-27049601 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039408	pseudogene	Chr10:29303246-29342851 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040281	pseudogene	Chr10:26530634-26574054 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0038639	pseudogene	Chr10:26671916-26712271 (-)

Homology

• Gene Tree
  4930519F09Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving 4930519F09Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000090126 (Evidence)
• NCBI Gene
  114676

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090126	Ensembl Gene Model | MGI Sequence Detail	1551	C57BL/6J
transcript	ENSMUST00000163084	Ensembl | MGI Sequence Detail	1111	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 12

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87