About   Help   FAQ
Akr1c20 Gene Detail
Summary
  • Symbol
    Akr1c20
  • Name
    aldo-keto reductase family 1, member C20
  • Synonyms
    2610528B18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2151104
    NCBI Gene: 116852
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:4536848-4573344 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 2.51 cM, cytoband A1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1111 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2151104
 protein coding gene Chr13:4536848-4573353 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020208
 protein coding gene Chr13:965680-1000744 (-)
A/J MGP_AJ_G0020164
 protein coding gene Chr13:1061174-1097869 (-)
AKR/J MGP_AKRJ_G0020139
 protein coding gene Chr13:1108876-1147317 (-)
BALB/cJ MGP_BALBcJ_G0020147
 protein coding gene Chr13:1066264-1101470 (-)
C3H/HeJ MGP_C3HHeJ_G0019951
 protein coding gene Chr13:1171027-1214297 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020594
 protein coding gene Chr13:1078151-1112616 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018205
 protein coding gene Chr13:1119112-1151891 (-)
CAST/EiJ MGP_CASTEiJ_G0019491
 protein coding gene Chr13:982464-1024095 (-)
CBA/J MGP_CBAJ_G0019918
 protein coding gene Chr13:1069667-1109813 (-)
DBA/2J MGP_DBA2J_G0020035
 protein coding gene Chr13:976946-1011085 (-)
FVB/NJ MGP_FVBNJ_G0020020
 protein coding gene Chr13:939833-975279 (-)
LP/J MGP_LPJ_G0020109
 protein coding gene Chr13:1064072-1108838 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020056
 protein coding gene Chr13:1201365-1219157 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020622
 protein coding gene Chr13:1040147-1086536 (-)
PWK/PhJ MGP_PWKPhJ_G0019252
 protein coding gene Chr13:1073072-1089605 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019059
 protein coding gene Chr13:1107151-1143760 (-)
WSB/EiJ MGP_WSBEiJ_G0019549
 protein coding gene Chr13:990999-1027379 (-)



Homology
more
  • Human Ortholog
    AKR1C1, aldo-keto reductase family 1 member C1
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    AKR1C1, aldo-keto reductase family 1 member C1
  • Synonyms
    20-ALPHA-HSD, 2-ALPHA-HSD, C9, DD1, DD1/DD2, DDH, DDH1, H-37, HAKRC, HBAB, MBAB
  • Links
    NCBI Gene ID: 1645
    neXtProt AC: NX_Q04828
    UniProt: Q04828

  • Chr Location
    10p15.1; chr10:4963253-4983283 (+)  GRCh38
  • Human Ortholog
    AKR1C2, aldo-keto reductase family 1 member C2
  • Synonyms
    AKR1C-pseudo, BABP, DD, DD-2, DD2, DD/BABP, DDH2, HAKRD, HBAB, MCDR2, SRXY8, TDD
  • Links
    NCBI Gene ID: 1646
    neXtProt AC: NX_P52895
    UniProt: P52895

  • Chr Location
    10p15.1; chr10:4987775-5018031 (-)  GRCh38
  • Human Ortholog
    AKR1C3, aldo-keto reductase family 1 member C3
  • Synonyms
    DD3, DDX, HA1753, HAKRB, HAKRe, hluPGFS, HSD17B5, PGFS
  • Links
    NCBI Gene ID: 8644
    neXtProt AC: NX_P42330
    UniProt: P42330

  • Chr Location
    10p15.1; chr10:5035354-5107686 (+)  GRCh38
  • Human Ortholog
    AKR1C4, aldo-keto reductase family 1 member C4
  • Synonyms
    3-alpha-HSD, C11, CDR, CHDR, DD-4, DD4, HAKRA
  • Links
    NCBI Gene ID: 1109
    neXtProt AC: NX_P17516
    UniProt: P17516

  • Chr Location
    10p15.1; chr10:5195462-5218949 (+)  GRCh38
Human Diseases
more
  • Diseases
    4 with human AKR1C2,AKR1C3,AKR1C4 associations

Human Disease Mouse Models
      
IDs
IDs
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    49
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    13
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000054757 Ensembl Gene Model | MGI Sequence Detail 36497 C57BL/6J ±  kb
transcript ENSMUST00000080361 Ensembl | MGI Sequence Detail 1337 Not Applicable  
polypeptide ENSMUSP00000079232 Ensembl | MGI Sequence Detail 323 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR020471 Aldo-keto reductase
    IPR018170 Aldo/keto reductase, conserved site
    IPR044482 Aldo-keto reductase family 1 member C
    IPR023210 NADP-dependent oxidoreductase domain
    IPR036812 NADP-dependent oxidoreductase domain superfamily
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 3
References
more
  • Summaries
    All 21
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:82195 Vergnes L, et al., A cluster of eight hydroxysteroid dehydrogenase genes belonging to the aldo-keto reductase supergene family on mouse chromosome 13. J Lipid Res. 2003 Mar;44(3):503-11
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory