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Vmn1r220 Gene Detail
Summary
  • Symbol
    Vmn1r220
  • Name
    vomeronasal 1 receptor 220
  • Synonyms
    V1rh12
  • Feature Type
    protein coding gene
  • IDs
    MGI:2159675
    NCBI Gene: 171271
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr13:23367798-23368694 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 9.55 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    135 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2159675
 protein coding gene Chr13:23362684-23372145 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020335
 protein coding gene Chr13:20504993-20505889 (-)
A/J MGP_AJ_G0020292
 protein coding gene Chr13:20090695-20091591 (-)
AKR/J MGP_AKRJ_G0020265
 protein coding gene Chr13:20398331-20399227 (-)
BALB/cJ MGP_BALBcJ_G0020281
 protein coding gene Chr13:20134119-20135015 (-)
C3H/HeJ MGP_C3HHeJ_G0020090
 protein coding gene Chr13:20449823-20450719 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020724
 protein coding gene Chr13:21308699-21309595 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018311
 protein coding gene Chr13:19024377-19025495 (-)
CAST/EiJ MGP_CASTEiJ_G0019610
 protein coding gene Chr13:20106677-20107542 (-)
CBA/J MGP_CBAJ_G0020041
 protein coding gene Chr13:22044099-22044995 (-)
DBA/2J MGP_DBA2J_G0020167
 protein coding gene Chr13:19761925-19762821 (-)
FVB/NJ MGP_FVBNJ_G0020154
 protein coding gene Chr13:19370951-19371847 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0020185
 protein coding gene Chr13:22428242-22430465 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020756
 protein coding gene Chr13:20290537-20291433 (-)
PWK/PhJ MGP_PWKPhJ_G0019368
 protein coding gene Chr13:19731810-19739008 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019178
 protein coding gene Chr13:19028666-19034162 (-)
WSB/EiJ MGP_WSBEiJ_G0019667
 protein coding gene Chr13:20333149-20334045 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Vmn1r220
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    13 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 171271 NCBI Gene Model | MGI Sequence Detail 897 C57BL/6J ±  kb
transcript NM_134237 RefSeq | MGI Sequence Detail 897 Not Specified  
polypeptide NP_598998 RefSeq | MGI Sequence Detail 298 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 17
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory