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Vmn1r198 Gene Detail
Summary
  • Symbol
    Vmn1r198
  • Name
    vomeronasal 1 receptor 198
  • Synonyms
    V1ri3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2159689
    NCBI Gene: 171254
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr13:22538516-22539418 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 8.59 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    110 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2159689
 protein coding gene Chr13:22534534-22544471 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020318
 protein coding gene Chr13:19686488-19687390 (+)
A/J MGP_AJ_G0020276
 protein coding gene Chr13:19277268-19278170 (+)
AKR/J MGP_AKRJ_G0020247
 protein coding gene Chr13:19576522-19577424 (+)
BALB/cJ MGP_BALBcJ_G0020263
 protein coding gene Chr13:19280960-19281862 (+)
C3H/HeJ MGP_C3HHeJ_G0020071
 protein coding gene Chr13:19649196-19650098 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020704
 protein coding gene Chr13:20384246-20385148 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0019595
 protein coding gene Chr13:19466655-19467557 (+)
CBA/J MGP_CBAJ_G0020023
 protein coding gene Chr13:21079445-21080347 (+)
DBA/2J MGP_DBA2J_G0020149
 protein coding gene Chr13:18886625-18887527 (+)
FVB/NJ MGP_FVBNJ_G0020134
 protein coding gene Chr13:18513345-18514247 (+)
LP/J MGP_LPJ_G0020223
 protein coding gene Chr13:19914821-19915723 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020167
 protein coding gene Chr13:21432653-21433555 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020736
 protein coding gene Chr13:19367453-19368355 (+)
PWK/PhJ MGP_PWKPhJ_G0019353
 protein coding gene Chr13:18980537-18981439 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019162
 protein coding gene Chr13:18326249-18327151 (+)
WSB/EiJ MGP_WSBEiJ_G0019654
 protein coding gene Chr13:19504971-19505873 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 171254 NCBI Gene Model | MGI Sequence Detail 903 C57BL/6J ±  kb
transcript NM_134220 RefSeq | MGI Sequence Detail 903 Not Specified  
polypeptide NP_598981 RefSeq | MGI Sequence Detail 300 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory