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Tceal1 Gene Detail
Summary
  • Symbol
    Tceal1
  • Name
    transcription elongation factor A (SII)-like 1
  • Synonyms
    0610011M09Rik, MGC:18752, P21, pp21
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385317
    NCBI Gene: 237052
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:135608731-135610622 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 59.10 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    97 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385317
 protein coding gene ChrX:135608731-135612227 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036102
 protein coding gene ChrX:134118336-134121832 (+)
A/J MGP_AJ_G0036083
 protein coding gene ChrX:133508832-133512328 (+)
AKR/J MGP_AKRJ_G0036007
 protein coding gene ChrX:137780747-137784243 (+)
BALB/cJ MGP_BALBcJ_G0036072
 protein coding gene ChrX:131913849-131917345 (+)
C3H/HeJ MGP_C3HHeJ_G0035781
 protein coding gene ChrX:134155848-134159344 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036596
 protein coding gene ChrX:138014018-138017514 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033423
 protein coding gene ChrX:125469028-125472527 (+)
CAST/EiJ MGP_CASTEiJ_G0035069
 protein coding gene ChrX:114944845-114948354 (+)
CBA/J MGP_CBAJ_G0035757
 protein coding gene ChrX:142260643-142264139 (+)
DBA/2J MGP_DBA2J_G0035914
 protein coding gene ChrX:132814440-132817936 (+)
FVB/NJ MGP_FVBNJ_G0035848
 protein coding gene ChrX:132024070-132027566 (+)
LP/J MGP_LPJ_G0036008
 protein coding gene ChrX:135085934-135089430 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035884
 protein coding gene ChrX:149559757-149563248 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036633
 protein coding gene ChrX:133485723-133489212 (+)
PWK/PhJ MGP_PWKPhJ_G0034762
 protein coding gene ChrX:111976611-111980100 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034590
 protein coding gene ChrX:115573451-115576942 (+)
WSB/EiJ MGP_WSBEiJ_G0035204
 protein coding gene ChrX:131805748-131809244 (+)



Homology
more
  • Human Ortholog
    TCEAL1, transcription elongation factor A like 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TCEAL1, transcription elongation factor A like 1
  • Synonyms
    HIJRS, NEDGFAX, p21, pp21, SIIR, WEX9
  • Links
    NCBI Gene ID: 9338
    neXtProt AC: NX_Q15170
    UniProt: Q15170

  • Chr Location
    Xq22.2; chrX:103628704-103630953 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    722
  • Tissues
    11
  • cDNA Data
    19
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 237052 NCBI Gene Model | MGI Sequence Detail 1892 C57BL/6J ±  kb
    transcript NM_001356367 RefSeq | MGI Sequence Detail 1218 C57BL/6  
    polypeptide Q921P9 UniProt | EBI | MGI Sequence Detail 165 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    • Protein Ontology
      PR:000016160 transcription elongation factor A protein-like 1
      (term hierarchy)
    • InterPro Domains
      IPR021156 Transcription elongation factor A-like/Brain expressed X-linked
    Molecular
    Reagents
    less
    • All nucleic 21
      cDNA 19
      Primer pair 1
      Other 1

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:1915606
    References
    more
    • Summaries
      All 32
      Developmental Gene Expression 2
      Diseases 1
      Gene Ontology 3
      Phenotypes 8
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory