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Adamtsl4 Gene Detail
Summary
  • Symbol
    Adamtsl4
  • Name
    ADAMTS-like 4
  • Synonyms
    Tsrc1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2389008
    NCBI Gene: 229595
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:95583511-95595228 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 40.74 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    334 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2389008
 protein coding gene Chr3:95583511-95595232 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027591
 protein coding gene Chr3:96441920-96453589 (-)
A/J MGP_AJ_G0027550
 protein coding gene Chr3:93428926-93440625 (-)
AKR/J MGP_AKRJ_G0027517
 protein coding gene Chr3:95604849-95618369 (-)
BALB/cJ MGP_BALBcJ_G0027562
 protein coding gene Chr3:93205717-93217737 (-)
C3H/HeJ MGP_C3HHeJ_G0027295
 protein coding gene Chr3:95899792-95913077 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028010
 protein coding gene Chr3:99994508-100006159 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025350
 protein coding gene Chr3:89758109-89769961 (-)
CAST/EiJ MGP_CASTEiJ_G0026745
 protein coding gene Chr3:95162540-95177333 (-)
CBA/J MGP_CBAJ_G0027272
 protein coding gene Chr3:103638283-103655174 (-)
DBA/2J MGP_DBA2J_G0027411
 protein coding gene Chr3:92716901-92728811 (-)
FVB/NJ MGP_FVBNJ_G0027382
 protein coding gene Chr3:90791251-90802915 (-)
LP/J MGP_LPJ_G0027520
 protein coding gene Chr3:97752951-97767110 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027409
 protein coding gene Chr3:109753567-109768595 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028064
 protein coding gene Chr3:95249571-95262793 (-)
PWK/PhJ MGP_PWKPhJ_G0026473
 protein coding gene Chr3:92606219-92618791 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026294
 protein coding gene Chr3:93529802-93546105 (-)
WSB/EiJ MGP_WSBEiJ_G0026827
 protein coding gene Chr3:95635547-95647260 (-)



Homology
more
  • Human Ortholog
    ADAMTSL4, ADAMTS like 4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ADAMTSL4, ADAMTS like 4
  • Synonyms
    ADAMTSL-4, ECTOL2, TSRC1
  • Links
    NCBI Gene ID: 54507
    neXtProt AC: NX_Q6UY14
    UniProt: Q6UY14

  • Chr Location
    1q21.2; chr1:150549369-150560937 (+)  GRCh38
Human Diseases
more
  • Diseases
    2 with Adamtsl4 mouse models; 2 with human ADAMTSL4 associations

Human Disease Mouse Models
      
IDs
 View 1 model
      
IDs
 View 1 model
      
IDs
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    18 phenotypes from 2 alleles in 2 genetic backgrounds
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for an ENU-induced single point mutation exhibit ectopia lentis, increased ocular axial length, and focal retinal pigment epithelium defects with reduced retinal pigmentation and altered cellular morphology.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    752
  • Tissues
    31
  • cDNA Data
    19
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000015850 Ensembl Gene Model | MGI Sequence Detail 11718 C57BL/6J ±  kb
    transcript ENSMUST00000117782 Ensembl | MGI Sequence Detail 4036 Not Applicable  
    polypeptide ENSMUSP00000113424 Ensembl | MGI Sequence Detail 1036 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 22
      cDNA 19
      Primer pair 3

      Microarray probesets 3
    References
    more
    • Summaries
      All 38
      Developmental Gene Expression 3
      Diseases 2
      Gene Ontology 5
      Phenotypes 13
    • Earliest
      J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory