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5930420M18Rik Gene Detail
Summary
  • Symbol
    5930420M18Rik
  • Name
    RIKEN cDNA 5930420M18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2441703
    NCBI Gene: 319223
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:31054644-31056924 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    131 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2441703
 lncRNA gene Chr5:31054644-31056924 (+)
129S1/SvImJ MGP_129S1SvImJ_G0001428
 unclassified gene Chr5:28855092-28858434 (+)
A/J MGP_AJ_G0001409
 unclassified gene Chr5:27919275-27921488 (+)
AKR/J MGP_AKRJ_G0001395
 unclassified gene Chr5:29070816-29073048 (+)
BALB/cJ MGP_BALBcJ_G0001405
 unclassified gene Chr5:28440752-28442997 (+)
C3H/HeJ MGP_C3HHeJ_G0001382
 unclassified gene Chr5:29063138-29066480 (+)
C57BL/6NJ MGP_C57BL6NJ_G0001522
 unclassified gene Chr5:30631229-30633581 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0001218
 unclassified gene Chr5:25397032-25399204 (+)
CAST/EiJ MGP_CASTEiJ_G0001360
 unclassified gene Chr5:28161712-28163923 (+)
CBA/J MGP_CBAJ_G0001373
 unclassified gene Chr5:31207695-31209950 (+)
DBA/2J MGP_DBA2J_G0001379
 unclassified gene Chr5:28101092-28103382 (+)
FVB/NJ MGP_FVBNJ_G0001388
 unclassified gene Chr5:27513033-27515698 (+)
LP/J MGP_LPJ_G0001434
 unclassified gene Chr5:29319853-29322132 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0001372
 unclassified gene Chr5:32098617-32101495 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0001509
 unclassified gene Chr5:28570213-28572512 (+)
PWK/PhJ MGP_PWKPhJ_G0001315
 unclassified gene Chr5:27217719-27220228 (+)
SPRET/EiJ MGP_SPRETEiJ_G0001286
 unclassified gene Chr5:27940379-27942636 (+)
WSB/EiJ MGP_WSBEiJ_G0001376
 unclassified gene Chr5:28636072-28638327 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107201 Ensembl Gene Model | MGI Sequence Detail 2281 C57BL/6J ±  kb
transcript AK077852 GenBank | ENA | DDBJ | MGI Sequence Detail 2282 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 22
    Diseases 1
    Phenotypes 17
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory