F830010H11Rik Gene Detail

Summary

• Symbol
  F830010H11Rik
• Name
  RIKEN cDNA F830010H11 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:2442048
  NCBI Gene: 115490385
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:47572143-47574472 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2442048	lncRNA gene	Chr6:47572143-47574472 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  1

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  1

• NCBI Gene
  115490385

Representative Sequences			Length	Strain/Species
genomic	115490385	NCBI Gene Model | MGI Sequence Detail	2330	C57BL/6J
transcript	NR_168258	RefSeq | MGI Sequence Detail	2330	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for F830010H11Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr56095	Chr6:47572095-47572151 (+)	-20 bp