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Camk1d Gene Detail
Summary
  • Symbol
    Camk1d
  • Name
    calcium/calmodulin-dependent protein kinase ID
  • Synonyms
    A630059D12Rik, CaMKIdelta, CKLiK, E030025C11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442190
    NCBI Gene: 227541
  • Alliance
    gene page
  • Transcription Start Sites
    24 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:5298268-5719326 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 3.39 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    12660 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442190
 protein coding gene Chr2:5298268-5719665 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025322
 protein coding gene Chr2:2408929-2836855 (-)
A/J MGP_AJ_G0025299
 protein coding gene Chr2:2281543-2703601 (-)
AKR/J MGP_AKRJ_G0025267
 protein coding gene Chr2:2339184-2780840 (-)
BALB/cJ MGP_BALBcJ_G0025295
 protein coding gene Chr2:2266862-2686515 (-)
C3H/HeJ MGP_C3HHeJ_G0025055
 protein coding gene Chr2:2331264-2756548 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025737
 protein coding gene Chr2:2440714-2913003 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023151
 protein coding gene Chr2:2123153-2522555 (-)
CAST/EiJ MGP_CASTEiJ_G0024518
 protein coding gene Chr2:2360836-2791024 (-)
CBA/J MGP_CBAJ_G0025034
 protein coding gene Chr2:2552000-3034417 (-)
DBA/2J MGP_DBA2J_G0025166
 protein coding gene Chr2:2243015-2657031 (-)
FVB/NJ MGP_FVBNJ_G0025128
 protein coding gene Chr2:2232281-2639725 (-)
LP/J MGP_LPJ_G0025252
 protein coding gene Chr2:2384738-2798759 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025160
 protein coding gene Chr2:2445755-2890643 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025795
 protein coding gene Chr2:2341007-2767001 (-)
PWK/PhJ MGP_PWKPhJ_G0024269
 protein coding gene Chr2:2234306-2650527 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024069
 protein coding gene Chr2:2347168-2768058 (-)
WSB/EiJ MGP_WSBEiJ_G0024588
 protein coding gene Chr2:2358013-2801676 (-)



Homology
more
  • Human Ortholog
    CAMK1D, calcium/calmodulin dependent protein kinase ID
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CAMK1D, calcium/calmodulin dependent protein kinase ID
  • Synonyms
    CaM-K1, CaMKID, CKLiK
  • Links
    NCBI Gene ID: 57118
    neXtProt AC: NX_Q8IU85
    UniProt: Q8IU85

  • Chr Location
    10p13; chr10:12349547-12835545 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    30
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    863
  • Tissues
    70
  • cDNA Data
    69
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000039145 Ensembl Gene Model | MGI Sequence Detail 421059 C57BL/6J ±  kb
    transcript ENSMUST00000044009 Ensembl | MGI Sequence Detail 6962 Not Applicable  
    polypeptide ENSMUSP00000037028 Ensembl | MGI Sequence Detail 385 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      5 Sequences
    • Protein Ontology
      PR:000004989 calcium/calmodulin-dependent protein kinase type 1D
      (term hierarchy)
    • EC
      2.7.11.17
    • InterPro Domains
      IPR017441 Protein kinase, ATP binding site
      IPR000719 Protein kinase domain
      IPR011009 Protein kinase-like domain superfamily
      IPR008271 Serine/threonine-protein kinase, active site
    • GlyGen
      Q8BW96 3 sites, 1 N-linked glycan (1 site), 1 O-linked glycan (2 sites)
    Molecular
    Reagents
    less
    • All nucleic 73
      cDNA 70
      Primer pair 1
      Other 2

      Microarray probesets 6
    Other
    Accession IDs
    less
    MGI:2444089
    References
    more
    • Summaries
      All 40
      Developmental Gene Expression 3
      Gene Ontology 8
      Phenotypes 9
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory