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Dcp1b Gene Detail
Summary
  • Symbol
    Dcp1b
  • Name
    decapping mRNA 1B
  • Synonyms
    B930050E02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442404
    NCBI Gene: 319618
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:119152214-119198575 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 56.55 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1122 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442404
 protein coding gene Chr6:119152214-119198577 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031190
 protein coding gene Chr6:121961730-122003627 (+)
A/J MGP_AJ_G0031159
 protein coding gene Chr6:117297846-117342152 (+)
AKR/J MGP_AKRJ_G0031090
 protein coding gene Chr6:120442260-120487621 (+)
BALB/cJ MGP_BALBcJ_G0031170
 protein coding gene Chr6:117069912-117111326 (+)
C3H/HeJ MGP_C3HHeJ_G0030539
 protein coding gene Chr6:63815995-63859521 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031628
 protein coding gene Chr6:125080870-125123483 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028789
 protein coding gene Chr6:114217669-114258009 (+)
CAST/EiJ MGP_CASTEiJ_G0030277
 protein coding gene Chr6:120870861-120913763 (+)
CBA/J MGP_CBAJ_G0030853
 protein coding gene Chr6:130026363-130071876 (+)
DBA/2J MGP_DBA2J_G0031009
 protein coding gene Chr6:116195820-116237898 (+)
FVB/NJ MGP_FVBNJ_G0030961
 protein coding gene Chr6:115323917-115365813 (+)
LP/J MGP_LPJ_G0031088
 protein coding gene Chr6:121976964-122019057 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030995
 protein coding gene Chr6:134053530-134104247 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031657
 protein coding gene Chr6:120488325-120531208 (+)
PWK/PhJ MGP_PWKPhJ_G0029992
 protein coding gene Chr6:115202986-115246900 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029821
 protein coding gene Chr6:119190926-119234627 (+)
WSB/EiJ MGP_WSBEiJ_G0030360
 protein coding gene Chr6:120744692-120790909 (+)



Homology
more
  • Human Ortholog
    DCP1B, decapping mRNA 1B
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    DCP1B, decapping mRNA 1B
  • Synonyms
    DCP1
  • Links
    NCBI Gene ID: 196513
    neXtProt AC: NX_Q8IZD4
    UniProt: Q8IZD4

  • Chr Location
    12p13.33; chr12:1941591-2004535 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    709
  • Tissues
    1
  • cDNA Data
    41
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 319618 NCBI Gene Model | MGI Sequence Detail 46362 C57BL/6J ±  kb
transcript NM_001033379 RefSeq | MGI Sequence Detail 3311 C57BL/6  
polypeptide Q3U564 UniProt | EBI | MGI Sequence Detail 578 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 42
    cDNA 41
    Primer pair 1

    Microarray probesets 5
References
more
  • Summaries
    All 35
    Developmental Gene Expression 1
    Gene Ontology 8
    Phenotypes 8
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:305571 Ibayashi M, et al., mRNA decapping factor Dcp1a is essential for embryonic growth in mice. Biochem Biophys Res Commun. 2021 May 28;555:128-133
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory