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9530059O14Rik Gene Detail
Summary
  • Symbol
    9530059O14Rik
  • Name
    RIKEN cDNA 9530059O14 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2442421
    NCBI Gene: 118567689, 319626
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:122397495-122541477 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 73.03 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3381 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442421
 lncRNA gene Chr9:122397495-122541477 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007523
 lincRNA gene Chr9:125568539-125676858 (+)
A/J MGP_AJ_G0007518
 lincRNA gene Chr9:120768781-120872421 (+)
AKR/J MGP_AKRJ_G0007490
 lincRNA gene Chr9:124013590-124125435 (+)
BALB/cJ MGP_BALBcJ_G0007495
 lincRNA gene Chr9:120693159-120794751 (+)
C3H/HeJ MGP_C3HHeJ_G0007440
 lincRNA gene Chr9:124448741-124556691 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007667
 lincRNA gene Chr9:129022772-129134320 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006847
 lincRNA gene Chr9:117910235-118005386 (+)
CAST/EiJ MGP_CASTEiJ_G0007344
 lincRNA gene Chr9:124481269-124585056 (+)
CBA/J MGP_CBAJ_G0007421
 lincRNA gene Chr9:133750184-133857822 (+)
DBA/2J MGP_DBA2J_G0007447
 lincRNA gene Chr9:120215368-120320062 (+)
FVB/NJ MGP_FVBNJ_G0007463
 lincRNA gene Chr9:119138803-119241514 (+)
LP/J MGP_LPJ_G0007528
 lincRNA gene Chr9:125910661-126015401 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007444
 lincRNA gene Chr9:134619353-134723627 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007672
 lincRNA gene Chr9:124461637-124573594 (+)
PWK/PhJ MGP_PWKPhJ_G0007284
 lincRNA gene Chr9:120669708-120772331 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007189
 lincRNA gene Chr9:124551457-124652520 (+)
WSB/EiJ MGP_WSBEiJ_G0007404
 lincRNA gene Chr9:124316821-124421624 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    8
Sequences &
Gene Models
less
  • All Sequences
    75
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097736 Ensembl Gene Model | MGI Sequence Detail 143983 C57BL/6J ±  kb
transcript ENSMUST00000181107 Ensembl | MGI Sequence Detail 3978 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
References
more
  • Summaries
    All 12
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory