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Tor4a Gene Detail
Summary
  • Symbol
    Tor4a
  • Name
    torsin family 4, member A
  • Synonyms
    A830007P12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442720
    NCBI Gene: 227612
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:25082978-25086898 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 17.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    166 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442720
 protein coding gene Chr2:25082732-25086898 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025422
 protein coding gene Chr2:23056265-23060185 (-)
A/J MGP_AJ_G0025399
 protein coding gene Chr2:22157810-22161730 (-)
AKR/J MGP_AKRJ_G0025369
 protein coding gene Chr2:22912348-22916268 (-)
BALB/cJ MGP_BALBcJ_G0025395
 protein coding gene Chr2:22280408-22284328 (-)
C3H/HeJ MGP_C3HHeJ_G0025156
 protein coding gene Chr2:22841547-22845467 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025839
 protein coding gene Chr2:23790123-23794043 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023250
 protein coding gene Chr2:21089222-21093165 (-)
CAST/EiJ MGP_CASTEiJ_G0024619
 protein coding gene Chr2:22725157-22729110 (-)
CBA/J MGP_CBAJ_G0025134
 protein coding gene Chr2:24626006-24629926 (-)
DBA/2J MGP_DBA2J_G0025267
 protein coding gene Chr2:22014080-22018000 (-)
FVB/NJ MGP_FVBNJ_G0025229
 protein coding gene Chr2:21753857-21757777 (-)
LP/J MGP_LPJ_G0025353
 protein coding gene Chr2:23003150-23007070 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025260
 protein coding gene Chr2:24830588-24834508 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025898
 protein coding gene Chr2:22858563-22862483 (-)
PWK/PhJ MGP_PWKPhJ_G0024367
 protein coding gene Chr2:21825269-21829212 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024167
 protein coding gene Chr2:23009037-23012970 (-)
WSB/EiJ MGP_WSBEiJ_G0024688
 protein coding gene Chr2:22930078-22933998 (-)



Homology
more
  • Human Ortholog
    TOR4A, torsin family 4 member A
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TOR4A, torsin family 4 member A
  • Synonyms
    C9orf167
  • Links
    NCBI Gene ID: 54863
    neXtProt AC: NX_Q9NXH8
    UniProt: Q9NXH8

  • Chr Location
    chr9:137277726-137282641 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    46
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000059555 Ensembl Gene Model | MGI Sequence Detail 3921 C57BL/6J ±  kb
transcript ENSMUST00000081869 Ensembl | MGI Sequence Detail 3255 Not Applicable  
polypeptide ENSMUSP00000080548 Ensembl | MGI Sequence Detail 426 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 46
    cDNA 46

    Microarray probesets 2
References
more
  • Summaries
    All 28
    Gene Ontology 5
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory