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Smtnl2 Gene Detail
Summary
  • Symbol
    Smtnl2
  • Name
    smoothelin-like 2
  • Synonyms
    D130058I21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442764
    NCBI Gene: 276829
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:72279990-72302539 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 44.15 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    539 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442764
 protein coding gene Chr11:72279989-72302539 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018638
 protein coding gene Chr11:73006780-73027700 (-)
A/J MGP_AJ_G0018606
 protein coding gene Chr11:70282560-70303097 (-)
AKR/J MGP_AKRJ_G0018575
 protein coding gene Chr11:72427865-72450261 (-)
BALB/cJ MGP_BALBcJ_G0018578
 protein coding gene Chr11:70576472-70598406 (-)
C3H/HeJ MGP_C3HHeJ_G0018391
 protein coding gene Chr11:72383725-72411035 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019029
 protein coding gene Chr11:75224003-75245963 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016672
 protein coding gene Chr11:67115558-67138462 (-)
CAST/EiJ MGP_CASTEiJ_G0017946
 protein coding gene Chr11:72753497-72775152 (-)
CBA/J MGP_CBAJ_G0018363
 protein coding gene Chr11:78553585-78583946 (-)
DBA/2J MGP_DBA2J_G0018472
 protein coding gene Chr11:69918745-69939299 (-)
FVB/NJ MGP_FVBNJ_G0018463
 protein coding gene Chr11:69461031-69482021 (-)
LP/J MGP_LPJ_G0018543
 protein coding gene Chr11:73516335-73544504 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018486
 protein coding gene Chr11:79111941-79135069 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019071
 protein coding gene Chr11:72621643-72642927 (-)
PWK/PhJ MGP_PWKPhJ_G0017719
 protein coding gene Chr11:70534841-70557573 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017509
 protein coding gene Chr11:72327534-72348269 (-)
WSB/EiJ MGP_WSBEiJ_G0018000
 protein coding gene Chr11:72362630-72388734 (-)



Homology
more
  • Human Ortholog
    SMTNL2, smoothelin like 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SMTNL2, smoothelin like 2
  • Links
    NCBI Gene ID: 342527
    neXtProt AC: NX_Q2TAL5
    UniProt: Q2TAL5

  • Chr Location
    17p13.2; chr17:4583999-4608319 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    716
  • Tissues
    10
  • cDNA Data
    21
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045667 Ensembl Gene Model | MGI Sequence Detail 22550 C57BL/6J ±  kb
transcript ENSMUST00000050226 Ensembl | MGI Sequence Detail 2624 Not Applicable  
polypeptide ENSMUSP00000059043 Ensembl | MGI Sequence Detail 456 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 23
    cDNA 21
    Primer pair 2

    Microarray probesets 3
References
more
  • Summaries
    All 30
    Developmental Gene Expression 3
    Phenotypes 11
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:281175 Yorgan TA, et al., Osteoblast-specific expression of Panx3 is dispensable for postnatal bone remodeling. Bone. 2019 Oct;127:155-163
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory