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A930006I01Rik Gene Detail
Summary
  • Symbol
    A930006I01Rik
  • Name
    RIKEN cDNA A930006I01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2442861
    NCBI Gene: 319854
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:103168946-103203109 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 54.43 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    289 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442861
 lncRNA gene Chr2:103168946-103203109 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005977
 lincRNA gene Chr2:105319222-105353338 (-)
A/J MGP_AJ_G0005970
 lincRNA gene Chr2:100968689-101002779 (-)
AKR/J MGP_AKRJ_G0005944
 lincRNA gene Chr2:103705339-103740007 (-)
BALB/cJ MGP_BALBcJ_G0005948
 lincRNA gene Chr2:101253306-101287294 (-)
C3H/HeJ MGP_C3HHeJ_G0005896
 lincRNA gene Chr2:104062570-104096623 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006108
 lincRNA gene Chr2:108861759-108896793 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005439
 lincRNA gene Chr2:96647314-96682049 (-)
CAST/EiJ MGP_CASTEiJ_G0005831
 lincRNA gene Chr2:104526459-104560390 (-)
CBA/J MGP_CBAJ_G0005881
 lincRNA gene Chr2:112574248-112610955 (-)
DBA/2J MGP_DBA2J_G0005902
 lincRNA gene Chr2:100535657-100569642 (-)
FVB/NJ MGP_FVBNJ_G0005926
 lincRNA gene Chr2:99534122-99569149 (-)
LP/J MGP_LPJ_G0005982
 lincRNA gene Chr2:105453241-105488119 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005913
 lincRNA gene Chr2:116495013-116532913 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006106
 lincRNA gene Chr2:103926288-103961202 (-)
PWK/PhJ MGP_PWKPhJ_G0005780
 lincRNA gene Chr2:100039236-100073743 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005692
 lincRNA gene Chr2:103145717-103181187 (-)
WSB/EiJ MGP_WSBEiJ_G0005884
 lincRNA gene Chr2:104630181-104664227 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving A930006I01Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 319854 NCBI Gene Model | MGI Sequence Detail 34164 C57BL/6J ±  kb
transcript NR_040332 RefSeq | MGI Sequence Detail 2229 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 11
    Phenotypes 4
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory