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Prelid3a Gene Detail
Summary
  • Symbol
    Prelid3a
  • Name
    PRELI domain containing 3A
  • Synonyms
    A230074A19Rik, Slmo1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442865
    NCBI Gene: 225655
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:67597936-67612905 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 39.99 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    602 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442865
 protein coding gene Chr18:67595119-67613651 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024525
 protein coding gene Chr18:67756137-67771670 (+)
A/J MGP_AJ_G0024492
 protein coding gene Chr18:64798059-64814295 (+)
AKR/J MGP_AKRJ_G0024462
 protein coding gene Chr18:66699786-66715282 (+)
BALB/cJ MGP_BALBcJ_G0024491
 protein coding gene Chr18:64967962-64984021 (+)
C3H/HeJ MGP_C3HHeJ_G0024259
 protein coding gene Chr18:66851649-66867188 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024938
 protein coding gene Chr18:69543917-69559564 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022369
 protein coding gene Chr18:64171301-64186810 (+)
CAST/EiJ MGP_CASTEiJ_G0023732
 protein coding gene Chr18:66852565-66869475 (+)
CBA/J MGP_CBAJ_G0024229
 protein coding gene Chr18:71947574-71964380 (+)
DBA/2J MGP_DBA2J_G0024359
 protein coding gene Chr18:64451766-64467272 (+)
FVB/NJ MGP_FVBNJ_G0024325
 protein coding gene Chr18:63823205-63838753 (+)
LP/J MGP_LPJ_G0024443
 protein coding gene Chr18:67619587-67635125 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024354
 protein coding gene Chr18:73217861-73233494 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024985
 protein coding gene Chr18:66866207-66882656 (+)
PWK/PhJ MGP_PWKPhJ_G0023475
 protein coding gene Chr18:64729073-64743214 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023278
 protein coding gene Chr18:66941442-67040368 (+)
WSB/EiJ MGP_WSBEiJ_G0023796
 protein coding gene Chr18:66774861-66789985 (+)



Homology
more
  • Human Ortholog
    PRELID3A, PRELI domain containing 3A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRELID3A, PRELI domain containing 3A
  • Synonyms
    C18orf43, HFL-EDDG1, SLMO1
  • Links
    NCBI Gene ID: 10650
    neXtProt AC: NX_Q96N28
    UniProt: Q96N28

  • Chr Location
    18p11.21; chr18:12407896-12432238 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    14
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024530 Ensembl Gene Model | MGI Sequence Detail 14970 C57BL/6J ±  kb
transcript ENSMUST00000235414 Ensembl | MGI Sequence Detail 753 Not Applicable  
polypeptide ENSMUSP00000157593 Ensembl | MGI Sequence Detail 215 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 4
References
more
  • Summaries
    All 27
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:151002 Pagliarini DJ, et al., A mitochondrial protein compendium elucidates complex I disease biology. Cell. 2008 Jul 11;134(1):112-23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory