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A230001M10Rik Gene Detail
Summary
  • Symbol
    A230001M10Rik
  • Name
    RIKEN cDNA A230001M10 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2443043
    NCBI Gene: 319951
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:102169721-102196087 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 44.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1084 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443043
 lncRNA gene Chr3:102169714-102352448 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006261
 lincRNA gene Chr3:103491021-103668271 (+)
A/J MGP_AJ_G0006254
 lincRNA gene Chr3:100192280-100370271 (+)
AKR/J MGP_AKRJ_G0006230
 lincRNA gene Chr3:102689834-102861738 (+)
BALB/cJ MGP_BALBcJ_G0006228
 lincRNA gene Chr3:99957023-100132417 (+)
C3H/HeJ MGP_C3HHeJ_G0006180
 lincRNA gene Chr3:102977289-103149073 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006393
 lincRNA gene Chr3:107298468-107495791 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005692
 lincRNA gene Chr3:96378502-96545046 (+)
CAST/EiJ MGP_CASTEiJ_G0006114
 lincRNA gene Chr3:102096488-102275487 (+)
CBA/J MGP_CBAJ_G0006164
 lincRNA gene Chr3:110992938-111175378 (+)
DBA/2J MGP_DBA2J_G0006185
 lincRNA gene Chr3:99439002-99624830 (+)
FVB/NJ MGP_FVBNJ_G0006206
 lincRNA gene Chr3:97376975-97552583 (+)
LP/J MGP_LPJ_G0006266
 lincRNA gene Chr3:104845147-105017989 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006197
 lincRNA gene Chr3:117122873-117316461 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006399
 lincRNA gene Chr3:102181685-102360489 (+)
PWK/PhJ MGP_PWKPhJ_G0006054
 lincRNA gene Chr3:99202772-99380475 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005965
 lincRNA gene Chr3:100264843-100436495 (+)
WSB/EiJ MGP_WSBEiJ_G0006161
 lincRNA gene Chr3:102736336-102912115 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving A230001M10Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    32
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 319951 NCBI Gene Model | MGI Sequence Detail 26367 C57BL/6J ±  kb
transcript NR_040391 RefSeq | MGI Sequence Detail 1864 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 12
    Diseases 1
    Phenotypes 4
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory