About   Help   FAQ
Pde12 Gene Detail
Summary
  • Symbol
    Pde12
  • Name
    phosphodiesterase 12
  • Synonyms
    E430028B21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443226
    NCBI Gene: 211948
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:26381113-26390823 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 16.09 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    325 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443226
 protein coding gene Chr14:26381113-26391038 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021084
 protein coding gene Chr14:19642069-19652023 (-)
A/J MGP_AJ_G0021033
 protein coding gene Chr14:18864050-18873978 (-)
AKR/J MGP_AKRJ_G0021010
 protein coding gene Chr14:19898190-19908120 (-)
BALB/cJ MGP_BALBcJ_G0021036
 protein coding gene Chr14:18980879-18990809 (-)
C3H/HeJ MGP_C3HHeJ_G0020820
 protein coding gene Chr14:19762576-19772506 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021469
 protein coding gene Chr14:20463283-20473206 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019032
 protein coding gene Chr14:19023844-19033915 (-)
CAST/EiJ MGP_CASTEiJ_G0020344
 protein coding gene Chr14:19368698-19380537 (-)
CBA/J MGP_CBAJ_G0020786
 protein coding gene Chr14:21279850-21289764 (-)
DBA/2J MGP_DBA2J_G0020909
 protein coding gene Chr14:18950095-18960298 (-)
FVB/NJ MGP_FVBNJ_G0020892
 protein coding gene Chr14:18913263-18923193 (-)
LP/J MGP_LPJ_G0020977
 protein coding gene Chr14:19908869-19918845 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020918
 protein coding gene Chr14:20608693-20619410 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021502
 protein coding gene Chr14:19667718-19678227 (-)
PWK/PhJ MGP_PWKPhJ_G0020093
 protein coding gene Chr14:18324811-18334558 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019916
 protein coding gene Chr14:19139226-19150598 (-)
WSB/EiJ MGP_WSBEiJ_G0020400
 protein coding gene Chr14:19705708-19715679 (-)



Homology
more
  • Human Ortholog
    PDE12, phosphodiesterase 12
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PDE12, phosphodiesterase 12
  • Synonyms
    2-PDE, 2'-PDE
  • Links
    NCBI Gene ID: 201626
    neXtProt AC: NX_Q6L8Q7
    UniProt: Q6L8Q7

  • Chr Location
    3p14.3; chr3:57556274-57656495 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    29
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    739
  • Tissues
    16
  • cDNA Data
    12
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 211948 NCBI Gene Model | MGI Sequence Detail 9711 C57BL/6J ±  kb
transcript NM_178668 RefSeq | MGI Sequence Detail 7510 C57BL/6  
polypeptide Q3TIU4 UniProt | EBI | MGI Sequence Detail 608 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 6
References
more
  • Summaries
    All 35
    Developmental Gene Expression 1
    Gene Ontology 7
    Phenotypes 10
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory