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Zbtb39 Gene Detail
Summary
  • Symbol
    Zbtb39
  • Name
    zinc finger and BTB domain containing 39
  • Synonyms
    7030401O21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443316
    NCBI Gene: 320080
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:127575407-127583218 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 74.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    237 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443316
 protein coding gene Chr10:127575399-127583218 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017833
 protein coding gene Chr10:131367985-131379115 (+)
A/J MGP_AJ_G0017808
 protein coding gene Chr10:126112721-126120567 (+)
AKR/J MGP_AKRJ_G0017771
 protein coding gene Chr10:129831478-129839288 (+)
BALB/cJ MGP_BALBcJ_G0017772
 protein coding gene Chr10:126512800-126520950 (+)
C3H/HeJ MGP_C3HHeJ_G0017596
 protein coding gene Chr10:129989843-129997583 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018227
 protein coding gene Chr10:135816463-135826149 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015907
 protein coding gene Chr10:120093820-120101676 (+)
CAST/EiJ MGP_CASTEiJ_G0017156
 protein coding gene Chr10:130656060-130663958 (+)
CBA/J MGP_CBAJ_G0017565
 protein coding gene Chr10:141304648-141310515 (+)
DBA/2J MGP_DBA2J_G0017671
 protein coding gene Chr10:125185907-125194752 (+)
FVB/NJ MGP_FVBNJ_G0017666
 protein coding gene Chr10:124131832-124139681 (+)
LP/J MGP_LPJ_G0017745
 protein coding gene Chr10:131942964-131949711 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017694
 protein coding gene Chr10:143976116-143984909 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018267
 protein coding gene Chr10:129911298-129920126 (+)
PWK/PhJ MGP_PWKPhJ_G0016941
 protein coding gene Chr10:125394292-125402565 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016733
 protein coding gene Chr10:128936937-128945617 (+)
WSB/EiJ MGP_WSBEiJ_G0017217
 protein coding gene Chr10:130130367-130139504 (+)



Homology
more
  • Human Ortholog
    ZBTB39, zinc finger and BTB domain containing 39
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZBTB39, zinc finger and BTB domain containing 39
  • Synonyms
    ZNF922
  • Links
    NCBI Gene ID: 9880
    neXtProt AC: NX_O15060
    UniProt: O15060

  • Chr Location
    12q13.3; chr12:56998836-57006546 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044617 Ensembl Gene Model | MGI Sequence Detail 7812 C57BL/6J ±  kb
transcript ENSMUST00000054287 Ensembl | MGI Sequence Detail 5960 Not Applicable  
polypeptide ENSMUSP00000052717 Ensembl | MGI Sequence Detail 712 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    3 Sequences
  • InterPro Domains
    IPR000210 BTB/POZ domain
    IPR011333 SKP1/BTB/POZ domain superfamily
    IPR047989 Zinc finger and BTB domain-containing protein 39, BTB/POZ domain
    IPR036236 Zinc finger C2H2 superfamily
    IPR013087 Zinc finger C2H2-type
Molecular
Reagents
less
  • All nucleic 11
    Genomic 2
    cDNA 9

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:308922 Medeiros de Araujo JA, et al., ZBTB20 is crucial for the specification of a subset of callosal projection neurons and astrocytes in the mammalian neocortex. Development. 2021 Aug 15;148(16):dev196642
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory