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Cdiptos Gene Detail
Summary
  • Symbol
    Cdiptos
  • Name
    CDIP transferase, opposite strand
  • Synonyms
    D830044I16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443610
    NCBI Gene: 381922
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:126571792-126575575 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 69.26 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    129 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443610
 protein coding gene Chr7:126570894-126575575 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007273
 lincRNA gene Chr7:131283401-131287777 (-)
A/J MGP_AJ_G0007270
 lincRNA gene Chr7:127799342-127803722 (-)
AKR/J MGP_AKRJ_G0007240
 lincRNA gene Chr7:131034876-131039252 (-)
BALB/cJ MGP_BALBcJ_G0007248
 lincRNA gene Chr7:127462301-127466677 (-)
C3H/HeJ MGP_C3HHeJ_G0007192
 lincRNA gene Chr7:130975034-130979410 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007418
 lincRNA gene Chr7:136386864-136391240 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006624
 lincRNA gene Chr7:129009918-129014503 (-)
CAST/EiJ MGP_CASTEiJ_G0007094
 lincRNA gene Chr7:122762448-122766827 (-)
CBA/J MGP_CBAJ_G0007175
 lincRNA gene Chr7:140973296-140977672 (-)
DBA/2J MGP_DBA2J_G0007196
 lincRNA gene Chr7:125773395-125777771 (-)
FVB/NJ MGP_FVBNJ_G0007218
 lincRNA gene Chr7:125623886-125628262 (-)
LP/J MGP_LPJ_G0007278
 lincRNA gene Chr7:132747664-132752040 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007195
 lincRNA gene Chr7:142141133-142145509 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007421
 lincRNA gene Chr7:130049350-130053726 (-)
PWK/PhJ MGP_PWKPhJ_G0007036
 lincRNA gene Chr7:118769101-118773477 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006945
 lincRNA gene Chr7:116888396-116892776 (-)
WSB/EiJ MGP_WSBEiJ_G0007155
 lincRNA gene Chr7:131025641-131030021 (-)



Homology
more
  • Human Ortholog
    CDIPTOSP, CDIP transferase opposite strand, pseudogene
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CDIPTOSP, CDIP transferase opposite strand, pseudogene
  • Synonyms
    CDIPT-AS1, lnc-CTHCC
  • Links
    NCBI Gene ID: 440356
    UniProt: P0DO92

  • Chr Location
    16p11.2; chr16:29863593-29868053 (+)  GRCh38
Human Diseases
less
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    39 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous null mice show decreased occurrence and development of chemically-induced hepatocellular carcinoma.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381922 NCBI Gene Model | MGI Sequence Detail 3784 C57BL/6J ±  kb
transcript NR_155498 RefSeq | MGI Sequence Detail 1004 C57BL/6  
polypeptide NP_001406536 RefSeq | MGI Sequence Detail 117 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
Other
Accession IDs
less
MGI:6120519
References
more
  • Summaries
    All 53
    Diseases 3
    Phenotypes 39
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:349484 Henis M, et al., The autism susceptibility kinase, TAOK2, phosphorylates eEF2 and modulates translation. Sci Adv. 2024 Apr 12;10(15):eadf7001
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory