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A230059L01Rik Gene Detail
Summary
  • Symbol
    A230059L01Rik
  • Name
    RIKEN cDNA A230059L01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2443688
    NCBI Gene: 320260
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr1:146678703-146683078 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 63.24 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    239 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443688
 lncRNA gene Chr1:146678703-146683078 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015117
 unclassified non-coding RNA gene Chr1:151283632-151288708 (-)
A/J MGP_AJ_G0015090
 unclassified non-coding RNA gene Chr1:145189646-145194599 (-)
AKR/J MGP_AKRJ_G0015053
 unclassified non-coding RNA gene Chr1:149669485-149673396 (-)
BALB/cJ MGP_BALBcJ_G0015053
 unclassified non-coding RNA gene Chr1:145686212-145690624 (-)
C3H/HeJ MGP_C3HHeJ_G0014876
 unclassified non-coding RNA gene Chr1:149820218-149826557 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015510
 unclassified non-coding RNA gene Chr1:156412936-156423747 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013256
 unclassified non-coding RNA gene Chr1:137793517-137797453 (-)
CAST/EiJ MGP_CASTEiJ_G0014431
 unclassified non-coding RNA gene Chr1:149237299-149239884 (-)
CBA/J MGP_CBAJ_G0014855
 unclassified non-coding RNA gene Chr1:161951767-161960364 (-)
DBA/2J MGP_DBA2J_G0014948
 unclassified non-coding RNA gene Chr1:144306699-144310335 (-)
FVB/NJ MGP_FVBNJ_G0014960
 unclassified non-coding RNA gene Chr1:142759639-142763461 (-)
LP/J MGP_LPJ_G0015031
 unclassified non-coding RNA gene Chr1:152262161-152266282 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0015548
 unclassified non-coding RNA gene Chr1:149412029-149415815 (-)
PWK/PhJ MGP_PWKPhJ_G0014223
 unclassified non-coding RNA gene Chr1:143197394-143201506 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0014534
 unclassified non-coding RNA gene Chr1:149524123-149528948 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087627 Ensembl Gene Model | MGI Sequence Detail 4376 C57BL/6J ±  kb
transcript ENSMUST00000126596 Ensembl | MGI Sequence Detail 2813 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory