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C920006O11Rik Gene Detail
Summary
  • Symbol
    C920006O11Rik
  • Name
    RIKEN cDNA C920006O11 gene
Location &
Maps
more
  • Sequence Map
    Chr9:78083872-78086119 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 43.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    178 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443759
 lncRNA gene Chr9:78083196-78086164 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007463
 lincRNA gene Chr9:78646876-78649841 (+)
A/J MGP_AJ_G0007458
 lincRNA gene Chr9:75903122-75906078 (+)
AKR/J MGP_AKRJ_G0007431
 lincRNA gene Chr9:77708135-77711098 (+)
BALB/cJ MGP_BALBcJ_G0007436
 lincRNA gene Chr9:75583975-75586931 (+)
C3H/HeJ MGP_C3HHeJ_G0007380
 lincRNA gene Chr9:78225200-78228163 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007608
 lincRNA gene Chr9:80754656-80757621 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0007284
 lincRNA gene Chr9:78572101-78575059 (+)
CBA/J MGP_CBAJ_G0007362
 lincRNA gene Chr9:83525706-83528668 (+)
DBA/2J MGP_DBA2J_G0007386
 lincRNA gene Chr9:75563999-75566962 (+)
FVB/NJ MGP_FVBNJ_G0007404
 lincRNA gene Chr9:74810296-74813252 (+)
LP/J MGP_LPJ_G0007468
 lincRNA gene Chr9:78874322-78877287 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007384
 lincRNA gene Chr9:84760082-84763044 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007611
 lincRNA gene Chr9:77884343-77887306 (+)
PWK/PhJ MGP_PWKPhJ_G0007224
 lincRNA gene Chr9:75798431-75801395 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007129
 lincRNA gene Chr9:78186465-78189394 (+)
WSB/EiJ MGP_WSBEiJ_G0007344
 lincRNA gene Chr9:77812166-77815134 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Radiation induced
    1
  • Genomic Mutations
    2 involving C920006O11Rik
  • Find Mice (IMSR)
    4 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    10
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097574 Ensembl Gene Model | MGI Sequence Detail 2248 C57BL/6J ±  kb
transcript ENSMUST00000238210 Ensembl | MGI Sequence Detail 281 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Phenotypes 9
  • Earliest
    J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory