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9530085L11Rik Gene Detail
Summary
  • Symbol
    9530085L11Rik
  • Name
    RIKEN cDNA 9530085L11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2443889
    NCBI Gene: 320362
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr8:13335352-13337466 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    145 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443889
 lncRNA gene Chr8:13335352-13337466 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002261
 unclassified gene Chr8:10624984-10627098 (-)
A/J MGP_AJ_G0002238
 unclassified gene Chr8:10238426-10240540 (-)
AKR/J MGP_AKRJ_G0002224
 unclassified gene Chr8:10520564-10522678 (-)
BALB/cJ MGP_BALBcJ_G0002233
 unclassified gene Chr8:10372248-10374362 (-)
C3H/HeJ MGP_C3HHeJ_G0002209
 unclassified gene Chr8:10728132-10730246 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002358
 unclassified gene Chr8:10998338-11000452 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0001974
 unclassified gene Chr8:9743501-9745858 (-)
CAST/EiJ MGP_CASTEiJ_G0002174
 unclassified gene Chr8:10488765-10490881 (-)
CBA/J MGP_CBAJ_G0002203
 unclassified gene Chr8:11455984-11458098 (-)
DBA/2J MGP_DBA2J_G0002206
 unclassified gene Chr8:10187708-10189822 (-)
FVB/NJ MGP_FVBNJ_G0002216
 unclassified gene Chr8:10204693-10206807 (-)
LP/J MGP_LPJ_G0002260
 unclassified gene Chr8:10531452-10533572 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002190
 unclassified gene Chr8:11687302-11689416 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002346
 unclassified gene Chr8:10577510-10579624 (-)
PWK/PhJ MGP_PWKPhJ_G0002134
 unclassified gene Chr8:10240460-10242580 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002098
 unclassified gene Chr8:10469613-10471750 (-)
WSB/EiJ MGP_WSBEiJ_G0002201
 unclassified gene Chr8:10614303-10616418 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    23
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107742 Ensembl Gene Model | MGI Sequence Detail 2115 C57BL/6J ±  kb
transcript AK035677 GenBank | ENA | DDBJ | MGI Sequence Detail 1879 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory