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Heatr5a Gene Detail
Summary
  • Symbol
    Heatr5a
  • Name
    HEAT repeat containing 5A
  • Synonyms
    D930036F22Rik, mKIAA1316
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444133
    NCBI Gene: 320487
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:51922654-52018104 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 22.11 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3301 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444133
 protein coding gene Chr12:51922654-52018154 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019728
 protein coding gene Chr12:50698749-50800884 (-)
A/J MGP_AJ_G0019690
 protein coding gene Chr12:48904582-49005802 (-)
AKR/J MGP_AKRJ_G0019661
 protein coding gene Chr12:50369187-50473578 (-)
BALB/cJ MGP_BALBcJ_G0019668
 protein coding gene Chr12:49190233-49285184 (-)
C3H/HeJ MGP_C3HHeJ_G0019471
 protein coding gene Chr12:50481417-50577828 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020116
 protein coding gene Chr12:52271109-52377009 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017739
 protein coding gene Chr12:47293125-47388206 (-)
CAST/EiJ MGP_CASTEiJ_G0019024
 protein coding gene Chr12:45517005-45619585 (-)
CBA/J MGP_CBAJ_G0019443
 protein coding gene Chr12:54059662-54168420 (-)
DBA/2J MGP_DBA2J_G0019557
 protein coding gene Chr12:48768639-48864654 (-)
FVB/NJ MGP_FVBNJ_G0019546
 protein coding gene Chr12:48201957-48299291 (-)
LP/J MGP_LPJ_G0019629
 protein coding gene Chr12:50730068-50829908 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019582
 protein coding gene Chr12:55684260-55786902 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020154
 protein coding gene Chr12:49866251-49970490 (-)
PWK/PhJ MGP_PWKPhJ_G0018791
 protein coding gene Chr12:43353607-43455459 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018585
 protein coding gene Chr12:44458972-44562033 (-)
WSB/EiJ MGP_WSBEiJ_G0019075
 protein coding gene Chr12:50353968-50453053 (-)



Homology
more
  • Human Ortholog
    HEATR5A, HEAT repeat containing 5A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    HEATR5A, HEAT repeat containing 5A
  • Synonyms
    C14orf125, p200b
  • Links
    NCBI Gene ID: 25938
    neXtProt AC: NX_Q86XA9
    UniProt: Q86XA9

  • Chr Location
    14q12
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    732
  • Tissues
    7
  • cDNA Data
    83
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000035181 Ensembl Gene Model | MGI Sequence Detail 95451 C57BL/6J ±  kb
transcript ENSMUST00000040583 Ensembl | MGI Sequence Detail 7763 Not Applicable  
polypeptide ENSMUSP00000043115 Ensembl | MGI Sequence Detail 2038 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 83
    cDNA 83

    Microarray probesets 3
References
more
  • Summaries
    All 30
    Developmental Gene Expression 3
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:275806 Wu D, et al., A Role for Sensory end Organ-Derived Signals in Regulating Muscle Spindle Proprioceptor Phenotype. J Neurosci. 2019 May 29;39(22):4252-4267
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory